RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZNF595	Q8IYB9	648 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	OR5L2	Q8NGL0	311 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	FBXL8	Q96CD0	374 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	SGCZ	Q96LD1	299 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	HOMER3	Q9NSC5	361 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	BOK	Q9UMX3	212 aa	Predicted RBP	13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	PPIE	Q9UNP9	301 aa	Known RBP	13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZKSCAN5	Q9Y2L8	839 aa		13.14	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZNF407	Q9C0G0	2248 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	CTAGE15	A4D2H0	777 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	TGFBR3L	H3BV60	316 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	EEF1E1	O43324	174 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	H2AFY	O75367	372 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	HEXA	P06865	529 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	PCSK6	P29122	969 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	PIGA	P37287	484 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	TRPC1	P48995	793 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	HNRNPF	P52597	415 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	PLA2G16	P53816	162 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	DCAF7	P61962	342 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	RUNX2	Q13950	521 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	RCN2	Q14257	317 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	POU4F3	Q15319	338 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	BBS9	Q3SYG4	887 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	RBM20	Q5T481	1227 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	NXPE4	Q6UWF7	544 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	CTAGE6	Q86UF2	777 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	THOC6	Q86W42	341 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	RNF10	Q8N5U6	811 aa	Known RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	MORN4	Q8NDC4	146 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	OR14A16	Q8NHC5	309 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	EGFL8	Q99944	293 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	SH3GL2	Q99962	352 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	NPL	Q9BXD5	320 aa	Predicted RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	SLC6A15	Q9H2J7	730 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	ATG4B	Q9Y4P1	393 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	KCNE2	Q9Y6J6	123 aa		13.13	□□□□□ -0.31
RC3H2-208	ENST00000478216	AKAP6	Q13023	2319 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	C17orf105	B2RV13	164 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	IL2RA	P01589	272 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	KRT14	P02533	472 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	SMIM10L1	P0DMW3	83 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	MLN	P12872	115 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	ENDOU	P21128	410 aa	Known RBP	13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZNF75D	P51815	510 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	CDKN2D	P55273	166 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	WNT3	P56703	355 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	RNF4	P78317	190 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	NKX6-1	P78426	367 aa	Predicted RBP	13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	FOXO1	Q12778	655 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	PRAMEF20	Q5VT98	475 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	TRIM40	Q6P9F5	258 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	MAATS1	Q7Z4T9	603 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	P3H2	Q8IVL5	708 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	KLHDC8A	Q8IYD2	350 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	ULK2	Q8IYT8	1036 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	VWA5B2	Q8N398	1253 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZNF321P	Q8N8H1	164 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	TMEM52	Q8NDY8	209 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	FAM13C	Q8NE31	585 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	TNIP2	Q8NFZ5	429 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	SLC22A8	Q8TCC7	542 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	SMIM10	Q96HG1	83 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	SERPINB12	Q96P63	405 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	TRMT1	Q9NXH9	659 aa	Known RBP	13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	SLC22A14	Q9Y267	594 aa		13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	FLNA	P21333	2647 aa	Known RBP	13.12	□□□□□ -0.31
RC3H2-208	ENST00000478216	FBN3	Q75N90	2809 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	CLCA1	A8K7I4	914 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	ARHGEF9	O43307	516 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	ENO2	P09104	434 aa	Predicted RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	EPX	P11678	715 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	GDF1	P27539	372 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	CERS1	P27544	350 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	HOXC12	P31275	282 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	HNRNPH1	P31943	449 aa	Known RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	HPD	P32754	393 aa	Predicted RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	ASPH	Q12797	758 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	DAZAP2	Q15038	168 aa	Predicted RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	HYAL4	Q2M3T9	481 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	SLC22A10	Q63ZE4	541 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	NAXE	Q8NCW5	288 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	TTL	Q8NG68	377 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	LINC01560	Q8TB33	94 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	SLC2A12	Q8TD20	617 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	HSPBAP1	Q96EW2	488 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	CSF3R	Q99062	836 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	ALOXE3	Q9BYJ1	711 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	PPAN	Q9NQ55	473 aa	Known RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	BEX4	Q9NWD9	120 aa	Predicted RBP	13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	DNAJC13	O75165	2243 aa		13.11	□□□□□ -0.31
RC3H2-208	ENST00000478216	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms