RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 SLC52A3Q9NQ40 469 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
LMNA-214ENST00000478063 MS4A12Q9NXJ0 267 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 KCMF1Q9P0J7 381 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 HCN3Q9P1Z3 774 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 DHCR7Q9UBM7 475 aaKnown RBP12.6□□□□□ -0.39
LMNA-214ENST00000478063 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 SRPK3Q9UPE1 567 aa12.6□□□□□ -0.39
LMNA-214ENST00000478063 C1orf226A1L170 272 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 ASPDHA6ND91 283 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 GLOD5A6NK44 160 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 H0YIG0 161 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 PROM1O43490 865 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CHST10O43529 356 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 SCRG1O75711 98 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CCL4P13236 92 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 DDX5P17844 614 aaKnown RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 TLX1P31314 330 aaPredicted RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 GCGRP47871 477 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 RASSF2P50749 326 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 RAB38P57729 211 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 NCALDP61601 193 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 SIM1P81133 766 aaPredicted RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 PLIN5Q00G26 463 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 MC2RQ01718 297 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 TLR1Q15399 786 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 MAPKAPK3Q16644 382 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 C1orf189Q5VU69 101 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CAMKMTQ7Z624 323 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 RETREG3Q86VR2 466 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 ANKRD46Q86W74 232 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 OR8J2Q8NGG1 315 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 UCN3Q969E3 161 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 EXOSC8Q96B26 276 aaKnown RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 COQ8BQ96D53 544 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 MVB12AQ96EY5 273 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CSF3RQ99062 836 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CTRCQ99895 268 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 BHLHE41Q9C0J9 482 aaPredicted RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 IL1RL2Q9HB29 575 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 APMAPQ9HDC9 416 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
LMNA-214ENST00000478063 C5AR2Q9P296 337 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 CDC14AQ9UNH5 594 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 LOXL2Q9Y4K0 774 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 MAU2Q9Y6X3 613 aa12.59□□□□□ -0.39
LMNA-214ENST00000478063 A0A1B0GX78 115 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 POLR1CO15160 346 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 PGRMC2O15173 223 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 GFRA3O60609 400 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 TBX19O60806 448 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 TIAF1O95411 115 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 FGF5P12034 268 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 RNH1P13489 461 aaKnown RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 EFNA1P20827 205 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 OR1D4P47884 311 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 PHC1P78364 1004 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 NFYCQ13952 458 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 IL11RAQ14626 422 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 COQ5Q5HYK3 327 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 C6orf10Q5SRN2 563 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 OR52E8Q6IFG1 317 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 DNAJC14Q6Y2X3 702 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 MSANTD1Q6ZTZ1 278 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 RAB11FIP2Q7L804 512 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 BPHLQ86WA6 291 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 RBM15BQ8NDT2 890 aaKnown RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 VPS37AQ8NEZ2 397 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 SLC7A6OSQ96CW6 309 aaPredicted RBP12.58□□□□□ -0.4
LMNA-214ENST00000478063 CLIP3Q96DZ5 547 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 PEX11GQ96HA9 241 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 RBCK1Q9BYM8 510 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 EHD3Q9NZN3 535 aa12.58□□□□□ -0.4
LMNA-214ENST00000478063 GVINP1Q7Z2Y8 2422 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 B4E171 279 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 GYG2O15488 501 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 PDPK1O15530 556 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 ERAL1O75616 437 aaKnown RBP12.57□□□□□ -0.4
LMNA-214ENST00000478063 KRT16P08779 473 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 HBQ1P09105 142 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 ITIH1P19827 911 aa12.57□□□□□ -0.4
LMNA-214ENST00000478063 ITGAXP20702 1163 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms