RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NDUFAF5Q5TEU4 345 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 C6orf163Q5TEZ5 329 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 PRSS41Q7RTY9 318 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 PACRGLQ8N7B6 248 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 EDAQ92838 391 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 HMGN4O00479 90 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ANXA6P08133 673 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CERS1P27544 350 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CXCL12P48061 93 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CDK9P50750 372 aaKnown RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 EFNA3P52797 238 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 MAZP56270 477 aaKnown RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 C2orf80Q0P641 193 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 FIGLAQ6QHK4 219 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 RAB42Q8N4Z0 105 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ZSCAN1Q8NBB4 408 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 OR5P2Q8WZ92 322 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 HSPA12BQ96MM6 686 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 PANX1Q96RD7 426 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 C17orf62Q9BQA9 187 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 LYRM4Q9HD34 91 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ARHGAP10A1A4S6 786 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 C2orf74A8MZ97 194 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CASC3O15234 703 aaKnown RBP11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CLPSP04118 112 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 RAP2AP10114 183 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 LIM2P55344 173 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 ITGA1P56199 1179 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 PPP2R2BQ00005 443 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 DUSP8Q13202 625 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CCNYL2Q5T2Q4 361 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 C18orf63Q68DL7 685 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 DHRS1Q96LJ7 313 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CSF3RQ99062 836 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 MAPKAP1Q9BPZ7 522 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CHST2Q9Y4C5 530 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 SLC22A7Q9Y694 548 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 CPAMD8Q8IZJ3 1885 aa11.46□□□□□ -0.57
PRPF39-203ENST00000477626 TRIM64CA6NLI5 447 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 ZNF888P0CJ79 500 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-203ENST00000477626 ARAFP10398 606 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 ST6GAL1P15907 406 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 UQCRC2P22695 453 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 RPL6Q02878 288 aaKnown RBP11.46□□□□□ -0.58
PRPF39-203ENST00000477626 TOR1AIP1Q5JTV8 583 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 ASPGQ86U10 573 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 OR4C15Q8NGM1 316 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 TFAP2CQ92754 450 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 COQ10BQ9H8M1 238 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 USE1Q9NZ43 259 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 TMEFF2Q9UIK5 374 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-203ENST00000477626 INVSQ9Y283 1065 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 LRCH1Q9Y2L9 728 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 ASPMQ8IZT6 3477 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 UQCRBP14927 111 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 BLKP51451 505 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 CLCN2P51788 898 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 MAPK12P53778 367 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 HHEXQ03014 270 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 FADDQ13158 208 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 GK3PQ14409 553 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 DNAJC14Q6Y2X3 702 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-203ENST00000477626 DEFB119Q8N690 84 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 OR8K5Q8NH50 307 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 PPCDCQ96CD2 204 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 CENPNQ96H22 339 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-203ENST00000477626 IL1RAPQ9NPH3 570 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 AASDHPPTQ9NRN7 309 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 BCAP29Q9UHQ4 241 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 RAB26Q9ULW5 256 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 PADI2Q9Y2J8 665 aa11.46□□□□□ -0.58
PRPF39-203ENST00000477626 SMIM18P0DKX4 95 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 POLR2CP19387 275 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-203ENST00000477626 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-203ENST00000477626 FUT4P22083 530 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 CSF2RBP32927 897 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 ADARB1P78563 741 aaKnown RBP11.45□□□□□ -0.58
PRPF39-203ENST00000477626 TNFRSF17Q02223 184 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 HEPHL1Q6MZM0 1159 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 SPATA24Q86W54 205 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 EID3Q8N140 333 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 TAMM41Q96BW9 452 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 CENPKQ9BS16 269 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 C5AR2Q9P296 337 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 DAPP1Q9UN19 280 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 RNF215Q9Y6U7 377 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 H0YGG7 62 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 AQP9O43315 295 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 MYO1DO94832 1006 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 ALPLP05186 524 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 MAGEA8P43361 318 aa11.45□□□□□ -0.58
PRPF39-203ENST00000477626 ARF3P61204 181 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-203ENST00000477626 SLAMF1Q13291 335 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms