RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CCR2P41597 374 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 YBX1P67809 324 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF155Q12901 538 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SLC13A2Q13183 592 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SLAMF1Q13291 335 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CAMK1Q14012 370 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZSWIM7Q19AV6 140 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 HSDL2Q6YN16 418 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CEP68Q76N32 757 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF761Q86XN6 746 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 COX18Q8N8Q8 333 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CHDHQ8NE62 594 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 FAM46DQ8NEK8 389 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 RPL3LQ92901 407 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 DNAJA3Q96EY1 480 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 RBM18Q96H35 190 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM19Q96HH6 336 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 IL37Q9NZH6 218 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM9Q9P0T7 183 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CACNA1IQ9P0X4 2223 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 PRR23D1E9PI22 279 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 J3KTA2 159 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 DYRK3O43781 588 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 PLOD3O60568 738 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 PRR23D2P0DMB1 279 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 C7P10643 843 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF12P17014 697 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 GTF2E2P29084 291 aaKnown RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CSTF2P33240 577 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CLCN2P51788 898 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 C1orf61Q13536 156 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 UGT8Q16880 541 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 LRRC26Q2I0M4 334 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM31Q5JXX7 168 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 HLA-DQA1Q5Y7H0 255 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 OLIG3Q7RTU3 272 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SLC22A16Q86VW1 577 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 GRHL3Q8TE85 626 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 FGF13Q92913 245 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 LRIG1Q96JA1 1093 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 SLC6A16Q9GZN6 736 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 LMAN2LQ9H0V9 348 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 IL1RAPQ9NPH3 570 aa10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-204ENST00000477421 CYP17A1P05093 508 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CRHBPP24387 322 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 NNATQ16517 81 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ANKDD1AQ495B1 522 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TMEM107Q6UX40 140 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 PEX5LQ8IYB4 626 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 IQCF1Q8N6M8 205 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 FAM98AQ8NCA5 519 aaKnown RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 OR10H4Q8NGA5 316 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CPEB1Q9BZB8 566 aaKnown RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 GORASP2Q9H8Y8 452 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TM7SF3Q9NS93 570 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 SLC25A37Q9NYZ2 338 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 MED16Q9Y2X0 877 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 M0R3H8 397 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ATP6V1G1O75348 118 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ALPPP05187 535 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ACPPP15309 386 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TMBIM6P55061 237 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 KCNC4Q03721 635 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TPRG1LQ5T0D9 272 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 GPR149Q86SP6 731 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 PIGXQ8TBF5 258 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF675Q8TD23 568 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 RASSF5Q8WWW0 418 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 MKLN1Q9UL63 735 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 FER1L6Q2WGJ9 1857 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 FAM170BA6NMN3 283 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 BTN3A3O00478 584 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TNFRSF21O75509 655 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CCNKO75909 580 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TCEA1P23193 301 aaKnown RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CNR2P34972 360 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 RAB25P57735 213 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 HOXC5Q00444 222 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 BIKQ13323 160 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 GINS1Q14691 196 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ANGPT1Q15389 498 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 HNRNPA1L2Q32P51 320 aaKnown RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF404Q494X3 552 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ZFP41Q8N8Y5 198 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ABHD11Q8NFV4 315 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TSACCQ96A04 125 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ISG20Q96AZ6 181 aaKnown RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 CPPED1Q9BRF8 314 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-204ENST00000477421 EHD1Q9H4M9 534 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF385DQ9H6B1 395 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 NKIRAS2Q9NYR9 191 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms