RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 FAM169AQ9Y6X4 670 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SPACA6W5XKT8 324 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MN1Q10571 1320 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 UBN2Q6ZU65 1347 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 KDM3AQ9Y4C1 1321 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 RFX7Q2KHR2 1363 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PARD3Q8TEW0 1356 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 YEATS2Q9ULM3 1422 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PLB1Q6P1J6 1458 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MEX3AA1L020 520 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 BCLAF3A2AJT9 711 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 MTMR11A4FU01 709 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SMCO2A6NFE2 343 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 URADA6NGE7 173 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 OR6C70A6NIJ9 312 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KBTBD13C9JR72 458 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 STX16O14662 325 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SLC30A4O14863 429 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CLIC2O15247 247 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 BCAT2O15382 392 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZNHIT1O43257 154 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 AKR7A2O43488 359 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GMFGO60234 142 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PFKFB2O60825 505 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PFDN1O60925 122 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ENTPD3O75355 529 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NDUFS6O75380 124 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 PSIP1O75475 530 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 ECI2O75521 394 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TOM1L1O75674 476 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CABYRO75952 493 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CCNB2O95067 398 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 LGI1O95970 557 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ASS1P00966 412 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 IGHV4-39P01824 125 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KRT8P05787 483 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 IGFBP1P08833 259 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 HNRNPA1P09651 372 aaKnown RBP eCLIP2.32□□□□□ -2.04
XRN1-211ENST00000477237 FAM86B2P0C5J1 330 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 UMPSP11172 480 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ICAM2P13598 275 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 DARSP14868 501 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 ETS1P14921 441 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 H2AFXP16104 143 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 CBR1P16152 277 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RAB4AP20338 218 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 EDN2P20800 178 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CYP2A7P20853 494 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CALB2P22676 271 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PTAFRP25105 342 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PTPN3P26045 913 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CD1BP29016 333 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 HOXA13P31271 388 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 GTF2H1P32780 548 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RORAP35398 523 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 HMGCLP35914 325 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CAPGP40121 348 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SLC1A4P43007 532 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GPR4P46093 362 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KRT6CP48668 564 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CASP4P49662 377 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ARSEP51690 589 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CRYBB1P53674 252 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 EIF3BP55884 814 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 AP1S2P56377 157 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SPCS3P61009 180 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ACTR3P61158 418 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 RPS8P62241 208 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 YWHAEP62258 255 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 SPIBQ01892 262 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 GLO1Q04760 184 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 UBE3AQ05086 875 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 DRP2Q13474 957 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ART3Q13508 389 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TUBB2AQ13885 445 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CAPRIN1Q14444 709 aaKnown RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 RPS6KA1Q15418 735 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NPTX1Q15818 432 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 PNLIPRP3Q17RR3 467 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 WHAMMP3Q1A5X7 153 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SLC5A12Q1EHB4 618 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 FAM83EQ2M2I3 478 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KRT24Q2M2I5 525 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 SGSM1Q2NKQ1 1148 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KLHL40Q2TBA0 621 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TWISTNBQ3B726 338 aaPredicted RBP2.32□□□□□ -2.04
XRN1-211ENST00000477237 HSDL1Q3SXM5 330 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 CCDC58Q4VC31 144 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ZCWPW2Q504Y3 356 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 TMEM35AQ53FP2 167 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 KLHL26Q53HC5 615 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 C2CD6Q53TS8 623 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NHSL2Q5HYW2 709 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD20A2Q5SQ80 823 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 C6orf183Q5T699 404 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ATAD3BQ5T9A4 648 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD20A1Q5TYW2 823 aa2.32□□□□□ -2.04
XRN1-211ENST00000477237 NAA35Q5VZE5 725 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms