RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 THYN1Q9P016 225 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 DNAJB9Q9UBS3 223 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 ITGA11Q9UKX5 1188 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 A0A087WWV3 80 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 B3GALNT1O75752 331 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 FGF19O95750 216 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 SRD5A2P31213 254 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 KIF5BP33176 963 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 ZNF131P52739 623 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 RBBP4Q09028 425 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 NFE2L1Q14494 772 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 ECSCRQ19T08 205 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 PARP10Q53GL7 1025 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 MPP7Q5T2T1 576 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 EMBQ6PCB8 327 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 GPD1LQ8N335 351 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 RTL3Q8N8U3 475 aaKnown RBP4.95□□□□□ -1.62
SMC5-203ENST00000475540 BANPQ8N9N5 519 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 BPIFA2Q96DR5 249 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 ANKRD27Q96NW4 1050 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 ACAT2Q9BWD1 397 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 LSG1Q9H089 658 aaKnown RBP4.95□□□□□ -1.62
SMC5-203ENST00000475540 PNNQ9H307 717 aaKnown RBP4.95□□□□□ -1.62
SMC5-203ENST00000475540 MARCH7Q9H992 704 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 PLEKHA3Q9HB20 300 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 UBE2TQ9NPD8 197 aaPredicted RBP4.95□□□□□ -1.62
SMC5-203ENST00000475540 DEPPQ9NTK1 212 aa4.95□□□□□ -1.62
SMC5-203ENST00000475540 ZNF107Q9UII5 783 aaPredicted RBP4.95□□□□□ -1.62
SMC5-203ENST00000475540 HCFC1P51610 2035 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 KBTBD13C9JR72 458 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 IFIT3O14879 490 aaKnown RBP4.94□□□□□ -1.62
SMC5-203ENST00000475540 DESP17661 470 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 SLC1A4P43007 532 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 GSK3BP49841 420 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 PTK6Q13882 451 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 CEACAM7Q14002 265 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 C3AR1Q16581 482 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 RFTN2Q52LD8 501 aaPredicted RBP4.94□□□□□ -1.62
SMC5-203ENST00000475540 CCDC158Q5M9N0 1113 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 MUC21Q5SSG8 566 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 PLPP4Q5VZY2 271 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 TBC1D10CQ8IV04 446 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 ZNF584Q8IVC4 421 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 TDHQ8IZJ6 230 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 RHOXF1Q8NHV9 184 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 KRT35Q92764 455 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 ATP6V0A1Q93050 837 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 SLC35C1Q96A29 364 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 VIPAS39Q9H9C1 493 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 ZNF581Q9P0T4 197 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 UBQLN2Q9UHD9 624 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 LIPT1Q9Y234 373 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 PFASO15067 1338 aa4.94□□□□□ -1.62
SMC5-203ENST00000475540 IGHV3-16A0A0C4DH30 117 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 A0A1B0GTH9 108 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 IGLON5A6NGN9 336 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 YDJCA8MPS7 323 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 CPLX1O14810 134 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 ZNF263O14978 683 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 KERAO60938 352 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 PRDM1O75626 825 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 CASTP20810 708 aaKnown RBP4.93□□□□□ -1.62
SMC5-203ENST00000475540 BACE1P56817 501 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 TYSND1Q2T9J0 566 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 POM121L1PQ3SYA9 428 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 RAB12Q6IQ22 244 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 VITQ6UXI7 678 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 TUSC5Q8IXB3 177 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 KLHL7Q8IXQ5 586 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 SIX6OS1Q8N1H7 587 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 ZNF619Q8N2I2 560 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 OR1B1Q8NGR6 318 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 OR4Q3Q8NH05 313 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 FIBINQ8TAL6 211 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 UBLCP1Q8WVY7 318 aaPredicted RBP4.93□□□□□ -1.62
SMC5-203ENST00000475540 PCNPQ8WW12 178 aaKnown RBP4.93□□□□□ -1.62
SMC5-203ENST00000475540 CKAP2Q8WWK9 683 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 C17orf62Q9BQA9 187 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 ATG101Q9BSB4 218 aa4.93□□□□□ -1.62
SMC5-203ENST00000475540 KIAA1217Q5T5P2 1943 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 LRRD1A4D1F6 860 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 ANKDD1BA6NHY2 528 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 FBP2O00757 339 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 CLN5O75503 358 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 PNPP00491 289 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 RENP00797 406 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 P4HA1P13674 534 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 ACTN3Q08043 901 aaPredicted RBP4.92□□□□□ -1.62
SMC5-203ENST00000475540 TMEM44Q2T9K0 475 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 NHSL2Q5HYW2 709 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 GLRA4Q5JXX5 417 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 LINC00696Q6ZRV3 163 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 SMYD1Q8NB12 490 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 RNF149Q8NC42 400 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 KIAA0895Q8NCT3 520 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 OR6F1Q8NGZ6 308 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 AGAP11Q8TF27 550 aa4.92□□□□□ -1.62
SMC5-203ENST00000475540 LIPHQ8WWY8 451 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms