RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 NADSYN1Q6IA69 706 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ARHGAP36Q6ZRI8 547 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 UBE2Q1Q7Z7E8 422 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 HORMAD1Q86X24 394 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 KMT2EQ8IZD2 1858 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TTC29Q8NA56 475 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 PNLDC1Q8NA58 520 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 OR52N1Q8NH53 320 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 FAM151AQ8WW52 585 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TRMT2BQ96GJ1 504 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 TAAR9Q96RI9 348 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 INSM2Q96T92 566 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 OSMRQ99650 979 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 GFI1Q99684 422 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 MRPL4Q9BYD3 311 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 GALNT9Q9HCQ5 603 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 SDHAF2Q9NX18 166 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 SEC14L3Q9UDX4 400 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 SLC39A10Q9ULF5 831 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TRBV6-7A0A0A0MS04 114 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 PIPSLA2A3N6 862 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TRABD2BA6NFA1 517 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 H3BNC9 293 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 M0R3G1 203 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 CFLARO15519 480 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 KCNQ2O43526 872 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 FADS2O95864 444 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 IFNA4P05014 189 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 HGFP14210 728 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 PRF1P14222 555 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ATP5A1P25705 553 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 DDX6P26196 483 aaKnown RBP eCLIP3.91□□□□□ -1.78
USP16-205ENST00000474835 GABRA5P31644 462 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 HSD17B2P37059 387 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ABCG1P45844 678 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 MAP2K3P46734 347 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 FGL1Q08830 312 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 LAMTOR4Q0VGL1 99 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TP53BP2Q13625 1128 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 DYRK1AQ13627 763 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 HABP2Q14520 560 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 ST3GAL2Q16842 350 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ARMCX4Q5H9R4 360 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ENTPD8Q5MY95 495 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 OVOS1Q6IE37 1185 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 UNQ9370/PRO34162Q6UXP9 181 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 AMIGO1Q86WK6 493 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 C1QL4Q86Z23 238 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 FAM126BQ8IXS8 530 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ZNF687Q8N1G0 1237 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 CCDC24Q8N4L8 307 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 MORN4Q8NDC4 146 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ZNF555Q8NEP9 628 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 OR9Q2Q8NGE9 314 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 HUS1BQ8NHY5 278 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 CEP76Q8TAP6 659 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 SLC39A7Q92504 469 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 CNOT9Q92600 299 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 NSMAFQ92636 917 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 AKAP1Q92667 903 aaKnown RBP eCLIP3.91□□□□□ -1.78
USP16-205ENST00000474835 KISS1RQ969F8 398 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 PMEPA1Q969W9 287 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 FAM120BQ96EK7 910 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 FDXACB1Q9BRP7 624 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 COPS4Q9BT78 406 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 ABCB9Q9NP78 766 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TLR8Q9NR97 1041 aaKnown RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 SPATA6Q9NWH7 488 aaPredicted RBP3.91□□□□□ -1.78
USP16-205ENST00000474835 ASB6Q9NWX5 421 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 MGAT4CQ9UBM8 478 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 TCFL5Q9UL49 500 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 PCDHB10Q9UN67 800 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 JAG2Q9Y219 1238 aa3.91□□□□□ -1.78
USP16-205ENST00000474835 IGLV3-16A0A075B6K0 115 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 E9PAM4 449 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 CD3EAPO15446 510 aaKnown RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 PRMT3O60678 531 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 SOX30O94993 753 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 DBTP11182 482 aaKnown RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 TYRP14679 529 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 GABRA1P14867 456 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 APEX1P27695 318 aaKnown RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 EEF1DP29692 281 aaKnown RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 MEOX2P50222 304 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 HTR6P50406 440 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 KPNA2P52292 529 aaKnown RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 NUDT6P53370 316 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 RAB25P57735 213 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 MTPNP58546 118 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 PPP3R1P63098 170 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 DSC1Q08554 894 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 MAB21L1Q13394 359 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 CYP27C1Q4G0S4 372 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 MSANTD2Q6P1R3 559 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 NLRC3Q7RTR2 1065 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 OAFQ86UD1 273 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 PIM3Q86V86 326 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 LYPD6Q86Y78 171 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 C9orf40Q8IXQ3 194 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 HS6ST3Q8IZP7 471 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms