RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TGM3Q08188 693 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 ZNF844Q08AG5 666 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 DDX39BQ13838 428 aaKnown RBP14.17□□□□□ -0.14
VARS-223ENST00000474643 RCN2Q14257 317 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 TBCCQ15814 346 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 SPINK14Q6IE38 97 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 METTL2BQ6P1Q9 378 aaKnown RBP14.17□□□□□ -0.14
VARS-223ENST00000474643 QSOX2Q6ZRP7 698 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
VARS-223ENST00000474643 CCDC63Q8NA47 563 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 WDR34Q96EX3 536 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 SEC16BQ96JE7 1060 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 SIGLEC12Q96PQ1 595 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 SLC6A16Q9GZN6 736 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 STMN4Q9H169 189 aaPredicted RBP14.17□□□□□ -0.14
VARS-223ENST00000474643 SENP1Q9P0U3 644 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 LRFN1Q9P244 771 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 CENPEQ02224 2701 aa14.17□□□□□ -0.14
VARS-223ENST00000474643 A0A0G2JN53 185 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 SAGE2PA6NJ88 616 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 FOXO6A8MYZ6 492 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CLDN4O14493 209 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 COPEO14579 308 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 ERI3O43414 337 aaKnown RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 B3GALT2O43825 422 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 SLC19A2O60779 497 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 PRAMEF4O60810 478 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CLEC3AO75596 197 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 EPORP19235 508 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CD96P40200 585 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CCT5P48643 541 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CYB561P49447 251 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 HYAL2Q12891 473 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 SLC13A2Q13183 592 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 PRAMEF9Q5VWM5 478 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 LIPJQ5W064 366 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 ZNF324BQ6AW86 544 aaPredicted RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 GRHL2Q6ISB3 625 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 H3F3CQ6NXT2 135 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 TRIM40Q6P9F5 258 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 SHISA5Q8N114 240 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 LGI4Q8N135 537 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 AMER2Q8N7J2 671 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 CREB3L4Q8TEY5 395 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 MZB1Q8WU39 189 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 GAL3ST3Q96A11 431 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 REPS1Q96D71 796 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 IQCGQ9H095 443 aaKnown RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 TSPAN10Q9H1Z9 355 aaPredicted RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 KLHL31Q9H511 634 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 NOL11Q9H8H0 719 aaKnown RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 ZNF490Q9ULM2 529 aaPredicted RBP14.16□□□□□ -0.14
VARS-223ENST00000474643 PCDHGB6Q9Y5F9 930 aa14.16□□□□□ -0.14
VARS-223ENST00000474643 POLEQ07864 2286 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 A8MT66 165 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 NPIPA5E9PKD4 350 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 HNRNPRO43390 633 aaKnown RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 SH3BGRLO75368 114 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 SLC25A12O75746 678 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 MYO1DO94832 1006 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 CLDN9O95484 217 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 MYZAPP0CAP1 466 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 ABOP16442 354 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 ZNF24P17028 368 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 KRT4P19013 534 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 CD22P20273 847 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 MST1P26927 711 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 CASP2P42575 452 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 PLA2G16P53816 162 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 BTG2P78543 158 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 CPSF6Q16630 551 aaKnown RBP eCLIP14.15□□□□□ -0.14
VARS-223ENST00000474643 TNFAIP8L3Q5GJ75 292 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 TTC19Q6DKK2 380 aaPredicted RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 RPTNQ6XPR3 784 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 GALNTL5Q7Z4T8 443 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 C4orf33Q8N1A6 199 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 KIF2BQ8N4N8 673 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 ADAMTS18Q8TE60 1221 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 RELTQ969Z4 430 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 MARVELD3Q96A59 401 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 CENPKQ9BS16 269 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 HES7Q9BYE0 225 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 REXO4Q9GZR2 422 aaKnown RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 ACBD3Q9H3P7 528 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 SEMA4BQ9NPR2 832 aaPredicted RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 PNO1Q9NRX1 252 aaKnown RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 PCTPQ9UKL6 214 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 FBXW2Q9UKT8 454 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 GRID1Q9ULK0 1009 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 NPIPA1Q9UND3 350 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 PCDHGA11Q9Y5H2 935 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 ACTL7BQ9Y614 415 aa14.15□□□□□ -0.14
VARS-223ENST00000474643 DIDO1Q9BTC0 2240 aaKnown RBP14.15□□□□□ -0.14
VARS-223ENST00000474643 TRBV11-1A0A0K0K1C0 115 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 LRIT2A6NDA9 550 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 UGDHO60701 494 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SUPT7LO94864 414 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 IFNA16P05015 189 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms