RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ACSM2AQ08AH3 577 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 DEFB109BQ30KR1 87 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 SPIN4Q56A73 249 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 ACSM2BQ68CK6 577 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 C18orf63Q68DL7 685 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 MED25Q71SY5 747 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 MRGPREQ86SM8 312 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 LRRC8CQ8TDW0 803 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 SNRNP27Q8WVK2 155 aaKnown RBP17.06■□□□□ 0.32
SNRPB-203ENST00000474384 METTL21AQ8WXB1 218 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 C8orf44Q96CB5 159 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 C3orf30Q96M34 536 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 PTCHD1Q96NR3 888 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 PRORYQ9H606 182 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 MS4A12Q9NXJ0 267 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 MRPS33Q9Y291 106 aaKnown RBP17.06■□□□□ 0.32
SNRPB-203ENST00000474384 EPG5Q9HCE0 2579 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 NBEAQ8NFP9 2946 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 A0A1W2PR48 441 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 SEC22BO75396 215 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PRKRAO75569 313 aaKnown RBP17.05■□□□□ 0.32
SNRPB-203ENST00000474384 JUNP05412 331 aaKnown RBP17.05■□□□□ 0.32
SNRPB-203ENST00000474384 C8orf89P0DMQ9 161 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 MAOAP21397 527 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PRPH2P23942 346 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 MAPK12P53778 367 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 OCRLQ01968 901 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 ATP1A4Q13733 1029 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 NR6A1Q15406 480 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
SNRPB-203ENST00000474384 TMEM205Q6UW68 189 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 KIRREL2Q6UWL6 708 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PLPP5Q8NEB5 264 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 TSLPQ969D9 159 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 NECTIN3Q9NQS3 549 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PRDM9Q9NQV7 894 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PRTFDC1Q9NRG1 225 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 C1orf109Q9NX04 203 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 TEX10Q9NXF1 929 aaPredicted RBP17.05■□□□□ 0.32
SNRPB-203ENST00000474384 P4HTMQ9NXG6 502 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 MCM8Q9UJA3 840 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 POLHQ9Y253 713 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 PCSK5Q92824 1860 aa17.05■□□□□ 0.32
SNRPB-203ENST00000474384 ATP6AP2A0A1C7CYW4 349 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 GNG14A0A1W2PPG7 69 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 PEX12O00623 359 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 CLDN4O14493 209 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 PCDH7O60245 1069 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 ATP6AP2O75787 350 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 TLX1P31314 330 aaPredicted RBP17.04■□□□□ 0.32
SNRPB-203ENST00000474384 TIA1P31483 386 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■■■■ 35.7
SNRPB-203ENST00000474384 BUD31P41223 144 aaPredicted RBP17.04■□□□□ 0.32
SNRPB-203ENST00000474384 HSD17B7P56937 341 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 TNFRSF17Q02223 184 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 EEF1A2Q05639 463 aaKnown RBP17.04■□□□□ 0.32
SNRPB-203ENST00000474384 SLC13A2Q13183 592 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 NSDHLQ15738 373 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 XKR7Q5GH72 579 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 GALNT18Q6P9A2 607 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 QSOX2Q6ZRP7 698 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 LANCL3Q6ZV70 420 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 GPR155Q7Z3F1 870 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 CLNKQ7Z7G1 428 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 ZNF595Q8IYB9 648 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 KIRREL3Q8IZU9 778 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 CKAP2Q8WWK9 683 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 UCN3Q969E3 161 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 TM4SF18Q96CE8 201 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
SNRPB-203ENST00000474384 PPP1R36Q96LQ0 422 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 IP6K3Q96PC2 410 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 CCT7Q99832 543 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 EBPLQ9BY08 206 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 LRTM1Q9HBL6 345 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 PFDN4Q9NQP4 134 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 SIRT5Q9NXA8 310 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 GIMAP2Q9UG22 337 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 MAN2B2Q9Y2E5 1009 aa17.04■□□□□ 0.32
SNRPB-203ENST00000474384 ARGFXA6NJG6 315 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 WASHC1A8K0Z3 465 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 NPIPB8E9PQR5 432 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 LSM1O15116 133 aaKnown RBP17.03■□□□□ 0.32
SNRPB-203ENST00000474384 CTNSO60931 367 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 MYO1DO94832 1006 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 AIFM1O95831 613 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 CYC1P08574 325 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 KITP10721 976 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 ACPPP15309 386 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 KIAA0040Q15053 153 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 GALNTL6Q49A17 601 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 NOXRED1Q6NXP6 359 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 RIPOR1Q6ZS17 1223 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 ANKRD37Q7Z713 158 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 SCUBE1Q8IWY4 988 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 ARFGAP2Q8N6H7 521 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 OR11G2Q8NGC1 345 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 C19orf60Q96EN9 201 aa17.03■□□□□ 0.32
SNRPB-203ENST00000474384 MAGEB18Q96M61 343 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms