RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NUDT9Q9BW91 350 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 SORBS1Q9BX66 1292 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 EPS8L2Q9H6S3 715 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 PNO1Q9NRX1 252 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 FARSBQ9NSD9 589 aaKnown RBP12.92□□□□□ -0.34
USF1-205ENST00000473969 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 ZNF225Q9UK10 706 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 ADAM29Q9UKF5 820 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 ACTL7BQ9Y614 415 aa12.92□□□□□ -0.34
USF1-205ENST00000473969 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 MGAQ8IWI9 3026 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 CYR61O00622 381 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TM9SF1O15321 606 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TYROBPO43914 113 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 ETHE1O95571 254 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 IFNA16P05015 189 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 KLK1P06870 262 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 FAM58BPP0C7Q3 252 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 PRR35P0CG20 571 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 UROSP10746 265 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 CREB1P16220 341 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TNNI3P19429 210 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 NR1D1P20393 614 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 BSGP35613 385 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TAS2R50P59544 299 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 KLRB1Q12918 225 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 BIKQ13323 160 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 SERTAD2Q14140 314 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 CASP8Q14790 479 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 CCNYL2Q5T2Q4 361 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 NUDCD3Q8IVD9 361 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 M1APQ8TC57 530 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 MESP1Q9BRJ9 268 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
USF1-205ENST00000473969 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
USF1-205ENST00000473969 SHCBP1LQ9BZQ2 653 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 ZNF552Q9H707 407 aaPredicted RBP12.91□□□□□ -0.34
USF1-205ENST00000473969 RPF2Q9H7B2 306 aaKnown RBP12.91□□□□□ -0.34
USF1-205ENST00000473969 MLXIPLQ9NP71 852 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 NECTIN3Q9NQS3 549 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TEKT2Q9UIF3 430 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
USF1-205ENST00000473969 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 A8MUA0 341 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 A8MUI8 341 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 B8ZZF3 427 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 DYRK3O43781 588 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 NPHS1O60500 1241 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 EEDO75530 441 aaKnown RBP12.9□□□□□ -0.34
USF1-205ENST00000473969 ZWINTO95229 277 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 BPGMP07738 259 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 SERPINB5P36952 375 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 EFNA3P52797 238 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 MAPK12P53778 367 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 TNFRSF17Q02223 184 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 Q0VFX4 171 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 TCHHL1Q5QJ38 904 aaPredicted RBP12.9□□□□□ -0.34
USF1-205ENST00000473969 PLAG1Q6DJT9 500 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 ISLR2Q6UXK2 745 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 CUZD1Q86UP6 607 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 SCUBE1Q8IWY4 988 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 METTL4Q8N3J2 472 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 ZNF843Q8N446 348 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 TANKQ92844 425 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 IMMP1LQ96LU5 166 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 CSF3RQ99062 836 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 HBEGFQ99075 208 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
USF1-205ENST00000473969 MECRQ9BV79 373 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 KCNK13Q9HB14 408 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 PTGFRNQ9P2B2 879 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 ANAPC2Q9UJX6 822 aa12.9□□□□□ -0.34
USF1-205ENST00000473969 IGKV3D-11A0A0A0MRZ8 115 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 A0A0A6YYD5 115 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 AZIN1O14977 448 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 GBAP04062 536 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 NR2F6P10588 404 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 COX7A2P14406 83 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 BTKQ06187 659 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 ACSM2AQ08AH3 577 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 SPIN4Q56A73 249 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 HHATQ5VTY9 493 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 ACSM2BQ68CK6 577 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 SCIMPQ6UWF3 145 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 HDXQ7Z353 690 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms