RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 MUTYHQ9UIF7 546 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVW-1Q9UQF0 538 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 MAGED1Q9Y5V3 778 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TAF1P21675 1872 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 GLYATL1P3A0A0U1RQE8 302 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A1B0GW55 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZC3H12DA2A288 527 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 C9orf170A2RU37 121 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 VSTM5A8MXK1 200 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 NME4O00746 187 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TPP1O14773 563 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 INPP4BO15327 924 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MPC2O95563 127 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GUCA1CO95843 209 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 FADS2O95864 444 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MBP02144 154 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CRYABP02511 175 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ALDOAP04075 364 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GP1BAP07359 652 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L2P0CJ85 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L3P0CJ86 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L4P0CJ87 422 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L5P0CJ88 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L6P0CJ89 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4L7P0CJ90 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ANXA3P12429 323 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GADD45AP24522 165 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 FPR3P25089 353 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MTNR1BP49286 362 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CASP6P55212 293 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVFRD-1P60508 538 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 RPP30P78346 268 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ILKQ13418 452 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DPYSL3Q14195 570 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SEC23BQ15437 767 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TARBP2Q15633 366 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CCDC157Q569K6 752 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SAXO2Q658L1 398 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 LAYNQ6UX15 382 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC46A3Q7Z3Q1 461 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DEFB132Q7Z7B7 95 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PAQR7Q86WK9 346 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PHYKPLQ8IUZ5 450 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 OR2T4Q8NH00 348 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CEP76Q8TAP6 659 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TBCKQ8TEA7 893 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CREB3L4Q8TEY5 395 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MYLIPQ8WY64 445 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 KCNA7Q96RP8 456 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MCCC1Q96RQ3 725 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 AGAP2Q99490 1192 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM175Q9BSA9 504 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 C2orf88Q9BSF0 95 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 AMBRA1Q9C0C7 1298 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MIXL1Q9H2W2 232 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 RHBGQ9H310 441 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MBNL3Q9NUK0 354 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 OR6C2Q9NZP2 312 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUX4Q9UBX2 424 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MBD1Q9UIS9 605 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A1B0GVI7 797 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 hCG_1984214I3L0E3 225 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 M0R233 179 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 UBE2CO00762 179 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TCAPO15273 167 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 XPNPEP2O43895 674 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MT-CYBP00156 380 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 HLA-DQB1P01920 261 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 APOC3P02656 99 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 FAHP16930 419 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TSPAN8P19075 237 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PVALBP20472 110 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 EFNA1P20827 205 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ITGB7P26010 798 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 NRIP1P48552 1158 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF81P51508 661 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SMAD4Q13485 552 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MAMLD1Q13495 774 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 USP10Q14694 798 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TBCEQ15813 527 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF79Q15937 498 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 UAP1L1Q3KQV9 507 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 AGKQ53H12 422 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 AVPI1Q5T686 147 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF470Q6ECI4 717 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PROSER1Q86XN7 944 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF540Q8NDQ6 660 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 IPMKQ8NFU5 416 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 IFI44Q8TCB0 444 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TMBIM1Q969X1 311 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 COQ8BQ96D53 544 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 LRRC46Q96FV0 321 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CELF6Q96J87 481 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 COQ10AQ96MF6 247 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 NSMCE2Q96MF7 247 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 Q96MT0 163 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SFXN2Q96NB2 322 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SIGLEC11Q96RL6 698 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms