RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GRK5P34947 590 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SOAT1P35610 550 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RECQLP46063 649 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 PCBP3P57721 371 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 FPGSQ05932 587 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MAB21L1Q13394 359 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 E2F2Q14209 437 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ZNF284Q2VY69 593 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 YIF1BQ5BJH7 314 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 DGKKQ5KSL6 1271 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RASGRP3Q8IV61 690 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.85□□□□□ -1.47
HERC4-209ENST00000473533 FAM217AQ8IXS0 508 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ADGRG2Q8IZP9 1017 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 FAM26EQ8N5C1 309 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PLA2G15Q8NCC3 412 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GPR26Q8NDV2 337 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 NLGN2Q8NFZ4 835 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR56A3Q8NH54 315 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GPR151Q8TDV0 419 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GTPBP3Q969Y2 492 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 WDR34Q96EX3 536 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SMIM14Q96QK8 99 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 FAM83CQ9BQN1 747 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ZSCAN5AQ9BUG6 496 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 POLR2J3Q9H1A7 115 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 NT5DC2Q9H857 520 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 HHATLQ9HCP6 504 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 A4GALTQ9NPC4 353 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MIEF1Q9NQG6 463 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PAK6Q9NQU5 681 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 C1GALT1Q9NS00 363 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GIMAP4Q9NUV9 329 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PAQR5Q9NXK6 330 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 LSM2Q9Y333 95 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 A0A1W2PRB8 838 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 TMEM129A0AVI4 362 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 H3BN98 237 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 HLA-DQB1P01920 261 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GALP22466 123 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 POU1F1P28069 291 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CCND3P30281 292 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 RPS19P39019 145 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 CAPZA2P47755 286 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SPINT3P49223 89 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 UBE3AQ05086 875 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RAB40BQ12829 278 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SSX1Q16384 188 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PLK5Q496M5 336 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 HSD17B12Q53GQ0 312 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 BRAT1Q6PJG6 821 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 KLHL17Q6TDP4 642 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 C17orf99Q6UX52 265 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CD300LDQ6UXZ3 194 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 USP30Q70CQ3 517 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SAPCD2Q86UD0 394 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 KRT78Q8N1N4 520 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 TRAM1L1Q8N609 369 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR52J3Q8NH60 311 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SUN5Q8TC36 379 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR5P2Q8WZ92 322 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RFKQ969G6 155 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OTULINQ96BN8 352 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ECHDC3Q96DC8 303 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 HYLS1Q96M11 299 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CAMK1GQ96NX5 476 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SLC38A2Q96QD8 506 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR5M11Q96RB7 305 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MTERF1Q99551 399 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 SDHCQ99643 169 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 P2RY13Q9BPV8 354 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 TSSK6Q9BXA6 273 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GPR62Q9BZJ7 368 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RC3H2Q9HBD1 1191 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 ICKQ9UPZ9 632 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SLC9A8Q9Y2E8 581 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 C2orf78A6NCI8 922 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 POLR1CO15160 346 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 OR10H3O60404 316 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 TPST2O60704 377 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ADAMTS4O75173 837 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SLC43A1O75387 559 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CSO75390 466 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 SEMA3DO95025 777 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CKBP12277 381 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ETFAP13804 333 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SMSP52788 366 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 EPHB3P54753 998 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 WNT4P56705 351 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 C2orf80Q0P641 193 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GAB1Q13480 694 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CAMK2BQ13554 666 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 NAE1Q13564 534 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 TP53BP2Q13625 1128 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 RIN1Q13671 783 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SF3A2Q15428 464 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 KCNA10Q16322 511 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 GLYR1Q49A26 553 aaPredicted RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 ATP13A5Q4VNC0 1218 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms