RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SCIMPQ6UWF3 145 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 Q6ZSR9 355 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 PPP1R32Q7Z5V6 425 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 DDIASQ8IXT1 998 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 LRRC34Q8IZ02 419 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 TANKQ92844 425 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 PPP3R2Q96LZ3 170 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 MAGEB18Q96M61 343 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 C1orf109Q9NX04 203 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 HS3ST3B1Q9Y662 390 aa18.81■□□□□ 0.6
SF1-213ENST00000472725 PIP5K1BO14986 540 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 TMPRSS11DO60235 418 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 CTNSO60931 367 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 JRKO75564 520 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 C8orf89P0DMQ9 161 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 TIA1P31483 386 aaKnown RBP eCLIP18.8■□□□□ 0.68e-7■■□□□ 12.2
SF1-213ENST00000472725 OTX2P32243 289 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 RRADP55042 308 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 SMU1Q2TAY7 513 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 RGS9BPQ6ZS82 235 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 SHISA6Q6ZSJ9 500 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 GPR155Q7Z3F1 870 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 MRGPREQ86SM8 312 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 SCUBE1Q8IWY4 988 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 PRSS58Q8IYP2 241 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 EFCAB3Q8N7B9 438 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 TMEM102Q8N9M5 508 aaPredicted RBP18.8■□□□□ 0.6
SF1-213ENST00000472725 AGR3Q8TD06 166 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 CKAP2Q8WWK9 683 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 APIPQ96GX9 242 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 FER1L6-AS2Q96M78 137 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 C7orf26Q96N11 449 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 ZNF395Q9H8N7 513 aaPredicted RBP18.8■□□□□ 0.6
SF1-213ENST00000472725 LRTM1Q9HBL6 345 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 PRTFDC1Q9NRG1 225 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 VTI1BQ9UEU0 232 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 FBXW2Q9UKT8 454 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 PTPRQQ9UMZ3 2332 aa18.8■□□□□ 0.6
SF1-213ENST00000472725 SOCS6O14544 535 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 PCDH7O60245 1069 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 B4GALT2O60909 372 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 LINC00032P0C843 101 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 PRKAR1AP10644 381 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 ACPPP15309 386 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 HNRNPH2P55795 449 aaKnown RBP18.79■□□□□ 0.6
SF1-213ENST00000472725 KIAA0040Q15053 153 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 NR6A1Q15406 480 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 NSDHLQ15738 373 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 PARP9Q8IXQ6 854 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 C19orf60Q96EN9 201 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 PTCHD1Q96NR3 888 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 FAIM2Q9BWQ8 316 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 RPF2Q9H7B2 306 aaKnown RBP18.79■□□□□ 0.6
SF1-213ENST00000472725 P4HTMQ9NXG6 502 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 ATG4BQ9Y4P1 393 aa18.79■□□□□ 0.6
SF1-213ENST00000472725 IGKV3D-11A0A0A0MRZ8 115 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 FAM227AF5H4B4 570 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 LSM1O15116 133 aaKnown RBP18.78■□□□□ 0.6
SF1-213ENST00000472725 VPS4BO75351 444 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 SEC22BO75396 215 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 CDC123O75794 336 aaPredicted RBP18.78■□□□□ 0.6
SF1-213ENST00000472725 FURINP09958 794 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 NR2F6P10588 404 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 RAE1P78406 368 aaKnown RBP18.78■□□□□ 0.6
SF1-213ENST00000472725 SERTAD2Q14140 314 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 FAM69BQ5VUD6 431 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 KIRREL2Q6UWL6 708 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 CRLF3Q8IUI8 442 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 APLFQ8IW19 511 aaPredicted RBP18.78■□□□□ 0.6
SF1-213ENST00000472725 FAM47BQ8NA70 645 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 PIWIL2Q8TC59 973 aaKnown RBP18.78■□□□□ 0.6
SF1-213ENST00000472725 FCRL1Q96LA6 429 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 CSF3RQ99062 836 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 RBCK1Q9BYM8 510 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 MAN2B2Q9Y2E5 1009 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 SCN2AQ99250 2005 aa18.78■□□□□ 0.6
SF1-213ENST00000472725 GNG14A0A1W2PPG7 69 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 A0A1W2PR48 441 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 TCRBV16S1A1N1A0A5B0 115 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 C1orf226A1L170 272 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 TRPC5OSA6NMA1 111 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 HDAC3O15379 428 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 GBAP04062 536 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 DRD2P14416 443 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 PCSK2P16519 638 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 MAPK1P28482 360 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 FOXL2P58012 376 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 AP2B1P63010 937 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 RHDQ02161 417 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 BTKQ06187 659 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 ZNF763Q0D2J5 394 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 SLC13A2Q13183 592 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 MAD2L1Q13257 205 aaPredicted RBP18.77■□□□□ 0.6
SF1-213ENST00000472725 HEPACAMQ14CZ8 416 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 ATP6AP1LQ52LC2 224 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 FAM219BQ5XKK7 198 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 OR52E8Q6IFG1 317 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 NOXRED1Q6NXP6 359 aa18.77■□□□□ 0.6
SF1-213ENST00000472725 CPEB2Q7Z5Q1 589 aaKnown RBP18.77■□□□□ 0.6
SF1-213ENST00000472725 OR11G2Q8NGC1 345 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms