RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 UROSP10746 265 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 VCLP18206 1134 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 PGFP49763 221 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 GSK3BP49841 420 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 PEX3P56589 373 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 SLC8A3P57103 927 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 SPHARQ15513 63 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 PRAMEF8Q5VWM4 474 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 RPAINQ86UA6 219 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 CCDC170Q8IYT3 715 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 THEM5Q8N1Q8 247 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 OR2L2Q8NH16 312 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 LRRC2Q9BYS8 371 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 STRADBQ9C0K7 418 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 MOB1AQ9H8S9 216 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 UBE2TQ9NPD8 197 aaPredicted RBP4.5□□□□□ -1.69
CLK1-209ENST00000472679 PNPLA3Q9NST1 481 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 DEPPQ9NTK1 212 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 ZNF346Q9UL40 294 aaKnown RBP4.5□□□□□ -1.69
CLK1-209ENST00000472679 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK1-209ENST00000472679 OR1A2Q9Y585 309 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 FER1L5A0AVI2 2057 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 OR5H15A6NDH6 313 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 FMO6PO60774 539 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 NUDT17P0C025 328 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 SBK2P0C263 348 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 FOLR2P14207 255 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 RPL9P32969 192 aaKnown RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 FHITP49789 147 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 SERPINH1P50454 418 aaKnown RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 NME5P56597 212 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 STX1BP61266 288 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 ZFP36L1Q07352 338 aaKnown RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 ZNF674Q2M3X9 581 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 KCTD11Q693B1 232 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 CAPN13Q6MZZ7 669 aaPredicted RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 TMEM270Q6UE05 265 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 CYP4V2Q6ZWL3 525 aaPredicted RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 SLC25A42Q86VD7 318 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 CATSPER3Q86XQ3 398 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 TBC1D10CQ8IV04 446 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 ZNF444Q8N0Y2 327 aaPredicted RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 TMCO5AQ8N6Q1 288 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 TRPV3Q8NET8 790 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 OR6F1Q8NGZ6 308 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 PRCCQ92733 491 aaPredicted RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 PTP4A1Q93096 173 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 VMP1Q96GC9 406 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 FOXN4Q96NZ1 517 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 PUS3Q9BZE2 481 aaKnown RBP4.49□□□□□ -1.69
CLK1-209ENST00000472679 TRIM7Q9C029 511 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 ZDHHC6Q9H6R6 413 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 PLEK2Q9NYT0 353 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 SPG21Q9NZD8 308 aa4.49□□□□□ -1.69
CLK1-209ENST00000472679 FAM149AA5PLN7 773 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 IGLON5A6NGN9 336 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 FBP2O00757 339 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 GALR3O60755 368 aaPredicted RBP4.48□□□□□ -1.69
CLK1-209ENST00000472679 PRDM1O75626 825 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 LMO2P25791 158 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 ID1P41134 155 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 KHKP50053 298 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 ECSCRQ19T08 205 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 SNRNP48Q6IEG0 339 aaKnown RBP4.48□□□□□ -1.69
CLK1-209ENST00000472679 IYDQ6PHW0 289 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 ZNF730Q6ZMV8 503 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 TMEM126BQ8IUX1 230 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 WDR49Q8IV35 697 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 C4orf32Q8N8J7 132 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 CCDC197Q8NCU1 140 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 ZNRF1Q8ND25 227 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 ULK4Q96C45 1275 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 RCHY1Q96PM5 261 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 SSX3Q99909 188 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 OSBPL8Q9BZF1 889 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 IL1RAPL2Q9NP60 686 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 THYN1Q9P016 225 aa4.48□□□□□ -1.69
CLK1-209ENST00000472679 COL2A1P02458 1487 aaPredicted RBP4.48□□□□□ -1.69
CLK1-209ENST00000472679 UMODL1Q5DID0 1318 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 TMEM129A0AVI4 362 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 ZNF724A8MTY0 619 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 CSO75390 466 aaKnown RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 EPOP01588 193 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 CHRNGP07510 517 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 B4GALT1P15291 398 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 BCL3P20749 454 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 GPX3P22352 226 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 GLRA1P23415 457 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 CCR4P51679 360 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 MFGE8Q08431 387 aaPredicted RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 RIGQ13278 110 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 RPS6KA1Q15418 735 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 POM121L1PQ3SYA9 428 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 SLC39A12Q504Y0 691 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 FAM182AQ5T1J6 154 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 C9orf66Q5T8R8 295 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 ALKBH5Q6P6C2 394 aaKnown RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 IQCA1Q86XH1 822 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms