RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TCRBV16S1A1N1A0A5B0 115 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 K7EM74 188 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 CRCPO75575 148 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 GBAP04062 536 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 PDGFAP04085 211 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 CHRNGP07510 517 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 CELA2AP08217 269 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 SFTPCP11686 197 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 CPN2P22792 545 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 ITGA3P26006 1051 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 HSD17B7P56937 341 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 SOX8P57073 446 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 MAGOHP61326 146 aaKnown RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 ZNF33BQ06732 778 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 GALNT1Q10472 559 aaPredicted RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 TBL3Q12788 808 aaKnown RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 LACTB2Q53H82 288 aaPredicted RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 PAPD4Q6PIY7 484 aaKnown RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 SCIMPQ6UWF3 145 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 COMMD6Q7Z4G1 85 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 AMER2Q8N7J2 671 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 OR6Y1Q8NGX8 325 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 SREK1Q8WXA9 508 aaKnown RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 IMMP1LQ96LU5 166 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 TUBB6Q9BUF5 446 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 MLXIPLQ9NP71 852 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 GPR83Q9NYM4 423 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 ADAM29Q9UKF5 820 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 ASB4Q9Y574 426 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 TLN1Q9Y490 2541 aaKnown RBP18.54■□□□□ 0.56
HDAC7-220ENST00000471235 BSNQ9UPA5 3926 aa18.54■□□□□ 0.56
HDAC7-220ENST00000471235 SERTM1A2A2V5 107 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 PRB1P04280 392 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 TPP2P29144 1249 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-220ENST00000471235 SERPINB3P29508 390 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 ARRB2P32121 409 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 OR4D2P58180 307 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 HMGCS1Q01581 520 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 SLC13A2Q13183 592 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 MYBPC3Q14896 1274 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 ARL13AQ5H913 290 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-220ENST00000471235 AGBL2Q5U5Z8 902 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 CES4AQ5XG92 561 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 CLEC6AQ6EIG7 209 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 TCTN3Q6NUS6 607 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 CYP20A1Q6UW02 462 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 CLNKQ7Z7G1 428 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 GPR180Q86V85 440 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 NUDCD3Q8IVD9 361 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 GBP7Q8N8V2 638 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-220ENST00000471235 ANKRD42Q8N9B4 389 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 SLC25A18Q9H1K4 315 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 ZNF71Q9NQZ8 489 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-220ENST00000471235 NMRK1Q9NWW6 199 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 AHSPQ9NZD4 102 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 VPS29Q9UBQ0 182 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 ATG4BQ9Y4P1 393 aa18.53■□□□□ 0.56
HDAC7-220ENST00000471235 TMEM120BA0PK00 339 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 WDR91A4D1P6 747 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 CLDN4O14493 209 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 AZIN1O14977 448 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 BIRC5O15392 142 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 PRKRAO75569 313 aaKnown RBP18.52■□□□□ 0.56
HDAC7-220ENST00000471235 KLK1P06870 262 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 FAM58BPP0C7Q3 252 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 UROSP10746 265 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 SERPINB5P36952 375 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 PGDP52209 483 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 VWA5B1Q5TIE3 1220 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 C18orf63Q68DL7 685 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 ATG14Q6ZNE5 492 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 PAGE2Q7Z2X7 111 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 HDXQ7Z353 690 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 KBTBD2Q8IY47 623 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 C1orf52Q8N6N3 182 aaKnown RBP18.52■□□□□ 0.56
HDAC7-220ENST00000471235 ARL8AQ96BM9 186 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 THOC3Q96J01 351 aaKnown RBP18.52■□□□□ 0.56
HDAC7-220ENST00000471235 LHPPQ9H008 270 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 MS4A12Q9NXJ0 267 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 G3BP2Q9UN86 482 aaKnown RBP18.52■□□□□ 0.56
HDAC7-220ENST00000471235 FIS1Q9Y3D6 152 aa18.52■□□□□ 0.56
HDAC7-220ENST00000471235 BOD1L1Q8NFC6 3051 aa18.52■□□□□ 0.55
HDAC7-220ENST00000471235 A0A1W2PR48 441 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 BLACEA4D250 179 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 PROM1O43490 865 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 CTNSO60931 367 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 C1QL1O75973 258 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 AIFM1O95831 613 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 SERPINA7P05543 415 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 PRR35P0CG20 571 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 NR2F6P10588 404 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 PPP2R1BP30154 601 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 ACTN3Q08043 901 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-220ENST00000471235 KANK2Q63ZY3 851 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 PLAG1Q6DJT9 500 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 LPAR4Q99677 370 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 SMAD5Q99717 465 aaKnown RBP18.51■□□□□ 0.55
HDAC7-220ENST00000471235 ZNF552Q9H707 407 aaPredicted RBP18.51■□□□□ 0.55
HDAC7-220ENST00000471235 VIPAS39Q9H9C1 493 aa18.51■□□□□ 0.55
HDAC7-220ENST00000471235 EML4Q9HC35 981 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms