RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 USP32Q8NFA0 1604 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 MYOCOSA0A1B0GUC4 107 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 DNM1LO00429 736 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 RTCAO00442 366 aaKnown RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC31A2O15432 143 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PI15O43692 258 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 MT-ND2P03891 347 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 HOXC6P09630 235 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 XRCC1P18887 633 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 NDUFV2P19404 249 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PRDX6P30041 224 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OXTRP30559 389 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 CLCN2P51788 898 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 DAG1Q14118 895 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PRAMEF14Q5SWL7 426 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 KIAA0319Q5VV43 1072 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PRAMEF13Q5VWM6 474 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 LANCL3Q6ZV70 420 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OTOP2Q7RTS6 562 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR4E2Q8NGC2 313 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR5B17Q8NGF7 314 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 STRADBQ9C0K7 418 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PORCNQ9H237 461 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 EXOSC1Q9Y3B2 195 aaKnown RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC7A4O43246 635 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 LILRB3O75022 631 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 FKTNO75072 461 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 DDNO94850 711 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 HTR3BO95264 441 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 IL7P13232 177 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PRKXP51817 358 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 DLX2Q07687 328 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SLC25A52Q3SY17 297 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 OR4F3Q6IEY1 312 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 GKN2Q86XP6 184 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 FAM122AQ96E09 287 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 DEFB118Q96PH6 123 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 SNX18Q96RF0 628 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 GNB4Q9HAV0 340 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 B4GALT7Q9UBV7 327 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 PPM1HQ9ULR3 514 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 RNF6Q9Y252 685 aa6.65□□□□□ -1.34
BRCA1-210ENST00000471181 LOC100130705A0A1B0GUX0 176 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 MSCO60682 206 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CDC123O75794 336 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 H6PDO95479 791 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CHRM1P11229 460 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TAS2R20P59543 309 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CAPSQ13938 189 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ZBED5Q49AG3 693 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 LRRC38Q5VT99 294 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ARL14EPQ8N8R7 260 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TMBIM1Q969X1 311 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 METTL2AQ96IZ6 378 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ACO2Q99798 780 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 FNIP2Q9P278 1114 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 GTF2IRD1Q9UHL9 959 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 RPL26L1Q9UNX3 145 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TLR6Q9Y2C9 796 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PUS1Q9Y606 427 aaKnown RBP eCLIP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CD8B2A6NJW9 211 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CYB5BO43169 146 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 RFPL1O75677 317 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 DIRAS1O95057 198 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PAK4O96013 591 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 GJB1P08034 283 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CD8BP10966 210 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PFKLP17858 780 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 CD9P21926 228 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 DNASE1P24855 282 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TNFRSF8P28908 595 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 HTR2BP41595 481 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 RPL7AP62424 266 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 FXNQ16595 210 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 FBXO43Q4G163 708 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TEX44Q53QW1 395 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 SUMF2Q8NBJ7 301 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 FAM83FQ8NEG4 500 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 EPS8L1Q8TE68 723 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 SLC35C1Q96A29 364 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PYCR2Q96C36 320 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 B3GNT5Q9BYG0 378 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 PCDHAC1Q9H158 963 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 EIF2B3Q9NR50 452 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 SERTAD3Q9UJW9 196 aa6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ZFR2Q9UPR6 939 aaKnown RBP6.65□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF821O75541 412 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PTPN2P17706 415 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NDUFS1P28331 727 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FCER1GP30273 86 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NPRL3Q12980 569 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms