RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 HERC1Q15751 4861 aa6.22□□□□□ -1.41
LDHB-206ENST00000470985 SNRNP200O75643 2136 aaKnown RBP6.22□□□□□ -1.41
LDHB-206ENST00000470985 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 ATP6AP2A0A1C7CYW4 349 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MBD3L3A6NE82 208 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 OR2W5A6NFC9 320 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 OR2AG2A6NM03 316 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 TRIM77I1YAP6 450 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MED7O43513 233 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 ATP6AP2O75787 350 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 GLSO94925 669 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 EPPINO95925 133 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 PF4V1P10720 104 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 PEPDP12955 493 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MAGP20916 626 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 CTSSP25774 331 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 PEBP1P30086 187 aaKnown RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 TIMP3P35625 211 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 GRIA3P42263 894 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MTNR1BP49286 362 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 FAM27E3Q08E93 113 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 TMEM115Q12893 351 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 PIN1Q13526 163 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 C2CD6Q53TS8 623 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MBNL2Q5VZF2 373 aaKnown RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 FBXW8Q8N3Y1 598 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 TRAM1L1Q8N609 369 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 RASGEF1AQ8N9B8 481 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MBD3L2Q8NHZ7 208 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 ANKRD9Q96BM1 317 aaPredicted RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 DHX58Q96C10 678 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 RBM41Q96IZ5 413 aaKnown RBP6.21□□□□□ -1.42
LDHB-206ENST00000470985 C10orf90Q96M02 699 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 LRGUKQ96M69 825 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 HS6ST2Q96MM7 605 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 BTBD9Q96Q07 612 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MGME1Q9BQP7 344 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 HGH1Q9BTY7 390 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 MED18Q9BUE0 208 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 LRRC27Q9C0I9 530 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 SYNCQ9H7C4 482 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.21□□□□□ -1.42
LDHB-206ENST00000470985 C14orf105Q9NVL8 296 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 COLEC10Q9Y6Z7 277 aa6.21□□□□□ -1.42
LDHB-206ENST00000470985 RBMY1BA6NDE4 496 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 PABPN1LA6NDY0 278 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 RBMY1EA6NEQ0 496 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 DFFAO00273 331 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 CDC7O00311 574 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 PRAMEF4O60810 478 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 KCNJ13O60928 360 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 TGFAP01135 160 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 SLC4A1P02730 911 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 PTMAP06454 111 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 RBMY1DP0C7P1 496 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 SLC35G4P0C7Q5 338 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 MGAT1P26572 445 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 OPRM1P35372 400 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 GGT5P36269 586 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 RENBPP51606 427 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 ARFIP2P53365 341 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 HILS1P60008 231 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 PRKG2Q13237 762 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 GTF2H3Q13889 308 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 RFTN1Q14699 578 aaPredicted RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 CA9Q16790 459 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 GLIPR1L2Q4G1C9 344 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 TMEM220Q6QAJ8 160 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 LACC1Q8IV20 430 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 GLB1L2Q8IW92 636 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 CYP4Z2PQ8N1L4 340 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 FAM109AQ8N4B1 249 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 NPWQ8N729 165 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 OR2M7Q8NG81 312 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 M1APQ8TC57 530 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 MRAPQ8TCY5 172 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 AKAP1Q92667 903 aaKnown RBP eCLIP6.2□□□□□ -1.42
LDHB-206ENST00000470985 ZNF285Q96NJ3 590 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 ZSCAN5AQ9BUG6 496 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 VN1R1Q9GZP7 353 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 MMP27Q9H306 513 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 TFB2MQ9H5Q4 396 aaKnown RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 LDAHQ9H6V9 325 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 METTL17Q9H7H0 456 aaPredicted RBP6.2□□□□□ -1.42
LDHB-206ENST00000470985 PCDHA7Q9UN72 937 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 CNTN6Q9UQ52 1028 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 CHKBQ9Y259 395 aa6.2□□□□□ -1.42
LDHB-206ENST00000470985 STARD9Q9P2P6 4700 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 ARHGAP42A6NI28 874 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 KPNA5O15131 536 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 STX10O60499 249 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 ERN1O75460 977 aaKnown RBP6.19□□□□□ -1.42
LDHB-206ENST00000470985 LY86O95711 162 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 SCGB1D2O95969 90 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 POLBP06746 335 aa6.19□□□□□ -1.42
LDHB-206ENST00000470985 CHRM5P08912 532 aaPredicted RBP6.19□□□□□ -1.42
LDHB-206ENST00000470985 DANCRP0C864 163 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms