RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	TMEM206	Q9H813	350 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.23	□□□□□ -1.73
SSB-209	ENST00000470621	MED17	Q9NVC6	651 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	THYN1	Q9P016	225 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	VPS18	Q9P253	973 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF319	Q9P2F9	582 aa		4.23	□□□□□ -1.73
SSB-209	ENST00000470621	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SSB-209	ENST00000470621		A0A087X0K7	114 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	MAGEB16	A2A368	324 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	OR5H15	A6NDH6	313 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	ZNF724	A8MTY0	619 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621		M0R296	226 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	TXNL1	O43396	289 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	GPRIN2	O60269	458 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	ATP9A	O75110	1047 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	IGHG1	P01857	330 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	IGHG3	P01860	377 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	HCK	P08631	526 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	SLC3A1	Q07837	685 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	NFE2L1	Q14494	772 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	TMEM44	Q2T9K0	475 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	MUC21	Q5SSG8	566 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	AGAP7P	Q5VUJ5	663 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621		Q6ZR54	194 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	KLHDC8A	Q8IYD2	350 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	FGFRL1	Q8N441	504 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	BANP	Q8N9N5	519 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	OR6F1	Q8NGZ6	308 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	TEKT1	Q969V4	418 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	SNRNP40	Q96DI7	357 aa	Known RBP	4.22	□□□□□ -1.73
SSB-209	ENST00000470621	PANX3	Q96QZ0	392 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	PRR34	Q9NV39	138 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	PSORS1C1	Q9UIG5	152 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	FBXL5	Q9UKA1	691 aa		4.22	□□□□□ -1.73
SSB-209	ENST00000470621	OBSCN	Q5VST9	7968 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621		A0A087WWV3	80 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	SDR42E2	A6NKP2	422 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	TTI1	O43156	1089 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	LYN	P07948	512 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	EZR	P15311	586 aa	Known RBP	4.21	□□□□□ -1.74
SSB-209	ENST00000470621	RPL9	P32969	192 aa	Known RBP	4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ID1	P41134	155 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	SLC1A4	P43007	532 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ARHGAP1	Q07960	439 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	CYLC2	Q14093	348 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ACKR1	Q16570	336 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	CCL14	Q16627	93 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	TYSND1	Q2T9J0	566 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	EMB	Q6PCB8	327 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ASPG	Q86U10	573 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	TBC1D10C	Q8IV04	446 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	SYCP3	Q8IZU3	236 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	NKAIN3	Q8N8D7	197 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	OR1B1	Q8NGR6	318 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ITLN1	Q8WWA0	313 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	RUNDC3B	Q96NL0	473 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	ZWILCH	Q9H900	591 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621	DNAJC17	Q9NVM6	304 aa	Known RBP	4.21	□□□□□ -1.74
SSB-209	ENST00000470621	FAM120C	Q9NX05	1096 aa	Known RBP	4.21	□□□□□ -1.74
SSB-209	ENST00000470621	TMEM161A	Q9NX61	479 aa		4.21	□□□□□ -1.74
SSB-209	ENST00000470621		H0Y626	953 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	SLC7A4	O43246	635 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	MT-ND1	P03886	318 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	C8orf89	P0DMQ9	161 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	NOV	P48745	357 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	FHIT	P49789	147 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	ST8SIA6	P61647	398 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	YWHAH	Q04917	246 aa	Predicted RBP	4.2	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF730	Q6ZMV8	503 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	NUFIP2	Q7Z417	695 aa	Known RBP	4.2	□□□□□ -1.74
SSB-209	ENST00000470621	WDR49	Q8IV35	697 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	SIAH3	Q8IW03	269 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	CCDC83	Q8IWF9	413 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	AP2M1	Q96CW1	435 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	JAKMIP1	Q96N16	626 aa	Known RBP	4.2	□□□□□ -1.74
SSB-209	ENST00000470621	PSMB7	Q99436	277 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	ZNF350	Q9GZX5	532 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	VIPAS39	Q9H9C1	493 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	NMUR1	Q9HB89	426 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	TP53TG3	Q9ULZ0	132 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	SPATA2	Q9UM82	520 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621	OR1A2	Q9Y585	309 aa		4.2	□□□□□ -1.74
SSB-209	ENST00000470621		A0A0A6YYC8	382 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB-209	ENST00000470621	TEX48	A0A1B0GUV7	120 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	ATP6AP2	A0A1C7CYW4	349 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621		I3L1I5	382 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB-209	ENST00000470621	CHUK	O15111	745 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	SYT7	O43581	403 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	SH3BGRL	O75368	114 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	FH	P07954	510 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	SERPINB6	P35237	376 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	PEX6	Q13608	980 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	LRRC38	Q5VT99	294 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	NUP93	Q8N1F7	819 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	CCDC197	Q8NCU1	140 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	FIBIN	Q8TAL6	211 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	SPATA18	Q8TC71	538 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	PCNP	Q8WW12	178 aa	Known RBP	4.19	□□□□□ -1.74
SSB-209	ENST00000470621	CDKN2AIPNL	Q96HQ2	116 aa		4.19	□□□□□ -1.74
SSB-209	ENST00000470621	CACNG6	Q9BXT2	260 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms