RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ZSCAN9O15535 394 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 FLRT2O43155 660 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NDUFS4O43181 175 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SRPX2O60687 465 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SLC22A3O75751 556 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ZBTB11O95625 1053 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NPPAP01160 153 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 IL6P05231 212 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ALDOCP09972 364 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 FTH1P19P0C7X4 201 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 GIMD1P0DJR0 217 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 BCKDHAP12694 445 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 COX4I1P13073 169 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 TYRP1P17643 537 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MAGP20916 626 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 PRPS1L1P21108 318 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 GPX3P22352 226 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 JAK1P23458 1154 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 PIK3R1P27986 724 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 PTPN4P29074 926 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ALDH4A1P30038 563 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 TIA1P31483 386 aaKnown RBP eCLIP6.31□□□□□ -1.41e-7■□□□□ 10.3
VAMP3-202ENST00000470357 HPCAL1P37235 193 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 GRK6P43250 576 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NEK2P51955 445 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 KCNK10P57789 538 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 C21orf58P58505 322 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 TRA2BP62995 288 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MEF2AQ02078 507 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ZNF763Q0D2J5 394 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 LRRC74AQ0VAA2 488 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 KIAA0040Q15053 153 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MMEL1Q495T6 779 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 DNAL1Q4LDG9 190 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 RFTN2Q52LD8 501 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 AGKQ53H12 422 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NOXRED1Q6NXP6 359 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 IRGCQ6NXR0 463 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 TRIM40Q6P9F5 258 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 WDR74Q6RFH5 385 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 CYP20A1Q6UW02 462 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MSANTD1Q6ZTZ1 278 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 RNF44Q7L0R7 432 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 R3HCC1LQ7Z5L2 792 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ASPGQ86U10 573 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SLCO6A1Q86UG4 719 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NUDT13Q86X67 352 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MCATQ8IVS2 390 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MRPL41Q8IXM3 137 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 METTL4Q8N3J2 472 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MINDY1Q8N5J2 469 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 C1orf52Q8N6N3 182 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NATD1Q8N6N6 113 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 C19orf47Q8N9M1 422 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ZNF740Q8NDX6 193 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 DNAJB8Q8NHS0 232 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 WDR48Q8TAF3 677 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NT5CQ8TCD5 201 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 CHTF18Q8WVB6 975 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 JPH3Q8WXH2 748 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MTERF3Q96E29 417 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 APOLD1Q96LR9 279 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 KCNC2Q96PR1 638 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 HBEGFQ99075 208 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 CCDC3Q9BQI4 270 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 TBCDQ9BTW9 1192 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 GTPBP2Q9BX10 602 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MRPL1Q9BYD6 325 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 DPY30Q9C005 99 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 C1orf21Q9H246 121 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 EFCAB1Q9HAE3 211 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 G3BP2Q9UN86 482 aaKnown RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 NDUFAF1Q9Y375 327 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 POLR3HQ9Y535 204 aaPredicted RBP6.31□□□□□ -1.4
VAMP3-202ENST00000470357 RNF215Q9Y6U7 377 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MGAQ8IWI9 3026 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 SPTA1P02549 2419 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 MN1Q10571 1320 aaPredicted RBP6.3□□□□□ -1.4
VAMP3-202ENST00000470357 ATMQ13315 3056 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 FEZF1A0PJY2 475 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 EME2A4GXA9 379 aaPredicted RBP6.3□□□□□ -1.4
VAMP3-202ENST00000470357 LRIT2A6NDA9 550 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 CFAP73A6NFT4 308 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 CCDC154A6NI56 674 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 TRIM38O00635 465 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 HAT1O14929 419 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 GYG2O15488 501 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 CFLARO15519 480 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 SIGLEC6O43699 453 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 PCDH7O60245 1069 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 CBX6O95503 412 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 CPNE6O95741 557 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 C9P02748 559 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 SERPIND1P05546 499 aa6.3□□□□□ -1.4
VAMP3-202ENST00000470357 GP1BAP07359 652 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms