RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 SPPL2CQ8IUH8 684 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TBC1D3Q8IZP1 549 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 LRTOMTQ8WZ04 291 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 HBEGFQ99075 208 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ASB1Q9Y576 335 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 AP3D1O14617 1153 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 FPGTO14772 594 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TSPAN4O14817 238 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 C1orf105O95561 183 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 GSTM2P28161 218 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CDK3Q00526 305 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SLBPQ14493 270 aaKnown RBP eCLIP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 DUOXA1Q1HG43 343 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 KLHL35Q6PF15 583 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 DNASE1L2Q92874 299 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CCDC115Q96NT0 180 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SCGB3A2Q96PL1 93 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 S100A13Q99584 98 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PCDHAC1Q9H158 963 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 MVB12BQ9H7P6 319 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ZNF282Q9UDV7 671 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ZNF225Q9UK10 706 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PLCL2Q9UPR0 1127 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TESMINQ9Y4I5 508 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PRAMEF33A0A0G2JMD5 474 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PRSS51A0A1B0GVH4 220 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PRAMEF10O60809 474 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 RASAL1O95294 804 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PLEKHG7Q6ZR37 379 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 USP30Q70CQ3 517 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PHACTR4Q8IZ21 702 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TTC29Q8NA56 475 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 FAM156AQ8NDB6 213 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SIPA1Q96FS4 1042 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SEMA3GQ9NS98 782 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 NUP50Q9UKX7 468 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 FZD4Q9ULV1 537 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PCDHA9Q9Y5H5 950 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CRATP43155 626 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 MS4A2Q01362 244 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SPANXN4Q5MJ08 99 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ZNF438Q7Z4V0 828 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ANKFN1Q8N957 763 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 NRG4Q8WWG1 115 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 DUSP26Q9BV47 211 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TRPC4Q9UBN4 977 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 LYVE1Q9Y5Y7 322 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 MAGEB17A8MXT2 336 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 H3BSA7 217 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 FOXE1O00358 373 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 MID1O15344 667 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SLC16A8O95907 504 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CD36P16671 472 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 YAP1P46937 504 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CCR8P51685 355 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 TAS2R43P59537 309 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 LSM3P62310 102 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 MRPS21P82921 87 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PTGR1Q14914 329 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 GATAD2AQ86YP4 633 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 SAMD14Q8IZD0 417 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 OXR1Q8N573 874 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 GALNT6Q8NCL4 622 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 DENND6BQ8NEG7 585 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 ASB12Q8WXK4 309 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CIDECQ96AQ7 238 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 C1GALT1C1Q96EU7 318 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 FOLH1BQ9HBA9 442 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 CLCA2Q9UQC9 943 aa6.7□□□□□ -1.34
GAPVD1-215ENST00000470056 BMP2P12643 396 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ZNF24P17028 368 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 AGERQ15109 404 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 HYLS1Q96M11 299 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 SLC39A3Q9BRY0 314 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 GON7Q9BXV9 100 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ANKRD60Q9BZ19 345 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 NPAP1Q9NZP6 1156 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ASB4Q9Y574 426 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 C9JVG2 144 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 M0R233 179 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 NRG2O14511 850 aaPredicted RBP6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 EI24O14681 340 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 HMGN1P05114 100 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ANXA3P12429 323 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 IMPA1P29218 277 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.346e-6■■□□□ 11.4
GAPVD1-215ENST00000470056 WASP42768 502 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 PFN3P60673 137 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 ADAM15Q13444 863 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 TAF8Q7Z7C8 310 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 SLC34A3Q8N130 599 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 MAP10Q9P2G4 905 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 PCDHGB7Q9Y5F8 929 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 TOR1BO14657 336 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 CCNB2O95067 398 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 AMD1P17707 334 aa6.69□□□□□ -1.34
GAPVD1-215ENST00000470056 TLX1P31314 330 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms