RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LIME1Q9H400 295 aa4.14□□□□□ -1.75
XRN1-207ENST00000468894 CUEDC2Q9H467 287 aa4.14□□□□□ -1.75
XRN1-207ENST00000468894 TMEM206Q9H813 350 aa4.14□□□□□ -1.75
XRN1-207ENST00000468894 UBE2TQ9NPD8 197 aaPredicted RBP4.14□□□□□ -1.75
XRN1-207ENST00000468894 MED17Q9NVC6 651 aa4.14□□□□□ -1.75
XRN1-207ENST00000468894 ZNF319Q9P2F9 582 aa4.14□□□□□ -1.75
XRN1-207ENST00000468894 A0A087WWV3 80 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ZNF724A8MTY0 619 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 SH3BGRLO75368 114 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 GH1P01241 217 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 OR1D2P34982 312 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 SLC1A4P43007 532 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ARHGAP1Q07960 439 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 CCL14Q16627 93 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ANKRD20A4Q4UJ75 823 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ANKRD20A8PQ5CZ79 823 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ANKRD20A2Q5SQ80 823 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ANKRD20A1Q5TYW2 823 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 ANKRD20A3Q5VUR7 823 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 EMBQ6PCB8 327 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 TBC1D10CQ8IV04 446 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 GOT1L1Q8NHS2 421 aaPredicted RBP4.13□□□□□ -1.75
XRN1-207ENST00000468894 ZNF274Q96GC6 653 aaPredicted RBP4.13□□□□□ -1.75
XRN1-207ENST00000468894 MARCH7Q9H992 704 aa4.13□□□□□ -1.75
XRN1-207ENST00000468894 A4D1N5 150 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 OR5H15A6NDH6 313 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ATP9AO75110 1047 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 FRAT2O75474 233 aaPredicted RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 RAD51DO75771 328 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 GLCEO94923 617 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 VENTXO95231 258 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 C8orf89P0DMQ9 161 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 SKILP12757 684 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 FHITP49789 147 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ROR1Q01973 937 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 FASTKQ14296 549 aaKnown RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 ACKR1Q16570 336 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 TYSND1Q2T9J0 566 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 TMEM44Q2T9K0 475 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ZNF506Q5JVG8 444 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 GBP6Q6ZN66 633 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ZNRF1Q8ND25 227 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ITLN1Q8WWA0 313 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 TEKT1Q969V4 418 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 RUNDC3BQ96NL0 473 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ERGIC2Q96RQ1 377 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 UTP14AQ9BVJ6 771 aaKnown RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 ACPTQ9BZG2 426 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 DNAJC17Q9NVM6 304 aaKnown RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 TMEM161AQ9NX61 479 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 MIS18AQ9NYP9 233 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ZNF581Q9P0T4 197 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 ZNF107Q9UII5 783 aaPredicted RBP4.12□□□□□ -1.75
XRN1-207ENST00000468894 FBXL5Q9UKA1 691 aa4.12□□□□□ -1.75
XRN1-207ENST00000468894 MAGEB16A2A368 324 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 PHOX2AO14813 284 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 MT-ND1P03886 318 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 LYNP07948 512 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 SLC1A6P48664 564 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 CYLC2Q14093 348 aaPredicted RBP4.11□□□□□ -1.75
XRN1-207ENST00000468894 CCDC158Q5M9N0 1113 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 HECTD3Q5T447 861 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 NKAIN3Q8N8D7 197 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 ZPLD1Q8TCW7 415 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
XRN1-207ENST00000468894 LRRC2Q9BYS8 371 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 ZWILCHQ9H900 591 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 GRPEL1Q9HAV7 217 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 SH3GLB2Q9NR46 395 aa4.11□□□□□ -1.75
XRN1-207ENST00000468894 IGLV3-10A0A075B6K4 115 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 ATP6AP2A0A1C7CYW4 349 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 BCLAF3A2AJT9 711 aaKnown RBP4.1□□□□□ -1.75
XRN1-207ENST00000468894 TRIM49BA6NDI0 452 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 H0Y626 953 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 SYT7O43581 403 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 STX6O43752 255 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 ST8SIA6P61647 398 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 MFGE8Q08431 387 aaPredicted RBP4.1□□□□□ -1.75
XRN1-207ENST00000468894 LRRC38Q5VT99 294 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 RNLSQ5VYX0 342 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 ZNF730Q6ZMV8 503 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 CYP4V2Q6ZWL3 525 aaPredicted RBP4.1□□□□□ -1.75
XRN1-207ENST00000468894 LRRC49Q8IUZ0 686 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
XRN1-207ENST00000468894 CLEC1AQ8NC01 280 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 SPATA18Q8TC71 538 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 CDKN2AIPNLQ96HQ2 116 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 PANX3Q96QZ0 392 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 ZNF350Q9GZX5 532 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 SP140LQ9H930 580 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 CLEC5AQ9NY25 188 aa4.1□□□□□ -1.75
XRN1-207ENST00000468894 TEX48A0A1B0GUV7 120 aa4.09□□□□□ -1.75
XRN1-207ENST00000468894 TMCO5BA8MYB1 307 aa4.09□□□□□ -1.75
XRN1-207ENST00000468894 CHUKO15111 745 aa4.09□□□□□ -1.75
XRN1-207ENST00000468894 TTI1O43156 1089 aa4.09□□□□□ -1.75
XRN1-207ENST00000468894 CSDE1O75534 798 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms