RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SNX8Q9Y5X2 465 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 GMEB1Q9Y692 573 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 TMEM131Q92545 1883 aa17.97■□□□□ 0.47
SMC4-209ENST00000468653 TCRBV5S2A0A599 114 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 TLCD2A6NGC4 264 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 PGRMC2O15173 223 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 GPIP06744 558 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 UMPSP11172 480 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 IL1RNP18510 177 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 SNRPNP63162 240 aaKnown RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 RGNQ15493 299 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 HLA-BQ31612 363 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 MTX3Q5HYI7 312 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 TMEM214Q6NUQ4 689 aaKnown RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 BBS4Q96RK4 519 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 DUSP23Q9BVJ7 150 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 RAB33BQ9H082 229 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 EPB41L1Q9H4G0 881 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 SLAMF7Q9NQ25 335 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 STARD5Q9NSY2 213 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ACSS1Q9NUB1 689 aaPredicted RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 EPHA6Q9UF33 1036 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 PHF11Q9UIL8 331 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ANAPC2Q9UJX6 822 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 TNRC6BQ9UPQ9 1833 aaKnown RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 IGHV1OR21-1A0A087WYE8 117 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 WASHC1A8K0Z3 465 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 HCRTR1O43613 425 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ERAL1O75616 437 aaKnown RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 KCNK5O95279 499 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 KRT75O95678 551 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 C9P02748 559 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ALPPL2P10696 532 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 UQCRC2P22695 453 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 NTSP30990 170 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 MLLT3P42568 568 aaPredicted RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 FRKP42685 505 aaPredicted RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 GPR3P46089 330 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 HSPB3Q12988 150 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 TRIP10Q15642 601 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 TBCELQ5QJ74 424 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.96■□□□□ 0.471e-13■■■■■ 65.9
SMC4-209ENST00000468653 PEAR1Q5VY43 1037 aaPredicted RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 CPZQ66K79 652 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ERICH5Q6P6B1 374 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 GPR155Q7Z3F1 870 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ADGRG5Q8IZF4 528 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 DNAJC22Q8N4W6 341 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 Q8N9G6 341 aaPredicted RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 OR5AK3PQ8NH89 298 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 CD180Q99467 661 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 PKP2Q99959 881 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 SPATA9Q9BWV2 254 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 NEUROD4Q9HD90 331 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ARMC1Q9NVT9 282 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 KLHL3Q9UH77 587 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 PADI4Q9UM07 663 aa17.96■□□□□ 0.47
SMC4-209ENST00000468653 MRPS2Q9Y399 296 aaKnown RBP17.96■□□□□ 0.47
SMC4-209ENST00000468653 NCOR1O75376 2440 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 TXNDC9O14530 226 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 DUX1O43812 170 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 SRPX2O60687 465 aaPredicted RBP17.95■□□□□ 0.46
SMC4-209ENST00000468653 NR2F6P10588 404 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 MYF5P13349 255 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 CPN2P22792 545 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 HOXD12P35452 270 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 BUD31P41223 144 aaPredicted RBP17.95■□□□□ 0.46
SMC4-209ENST00000468653 CRATP43155 626 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 AMZ1Q400G9 498 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 IRAK1BP1Q5VVH5 260 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 SLC48A1Q6P1K1 146 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 RABEPKQ7Z6M1 372 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 ZZZ3Q8IYH5 903 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 ZFP28Q8NHY6 868 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 CEP76Q8TAP6 659 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 PPWD1Q96BP3 646 aaKnown RBP17.95■□□□□ 0.46
SMC4-209ENST00000468653 VCX3BQ9H321 246 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 RAD21L1Q9H4I0 556 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 CXorf36Q9H7Y0 433 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 GIMAP4Q9NUV9 329 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 ACSL6Q9UKU0 697 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 PSME2Q9UL46 239 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 ENTPD4Q9Y227 616 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 CABIN1Q9Y6J0 2220 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 V9GYQ6 96 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 PI4KAP42356 2102 aa17.95■□□□□ 0.46
SMC4-209ENST00000468653 CREG1O75629 220 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 RUNX2Q13950 521 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 LRRC36Q1X8D7 754 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 VMACQ2NL98 169 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SPDYE7PQ495Y7 208 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 LPCAT4Q643R3 524 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 LILRA2Q8N149 483 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 OR52N2Q8NGI0 321 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 LRTOMTQ8WZ04 291 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 DPH2Q9BQC3 489 aaPredicted RBP17.94■□□□□ 0.46
SMC4-209ENST00000468653 TRIM4Q9C037 500 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms