RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 KBTBD2Q8IY47 623 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CENPLQ8N0S6 344 aaPredicted RBP13.64□□□□□ -0.23
COL27A1-203ENST00000468565 TTLQ8NG68 377 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 METTL21AQ8WXB1 218 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CMTM5Q96DZ9 223 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 OR1F2PQ96R84 312 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 NT5DC2Q9H857 520 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CLK4Q9HAZ1 481 aaKnown RBP13.64□□□□□ -0.23
COL27A1-203ENST00000468565 SLAMF7Q9NQ25 335 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 IGSF5Q9NSI5 407 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 DNAJC11Q9NVH1 559 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 NUDT4Q9NZJ9 180 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CD274Q9NZQ7 290 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 PTBP2Q9UKA9 531 aaKnown RBP13.64□□□□□ -0.23
COL27A1-203ENST00000468565 B3GNT3Q9Y2A9 372 aa13.64□□□□□ -0.23
COL27A1-203ENST00000468565 CCDC189A1A4V9 331 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 JRKO75564 520 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 STK16O75716 305 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 S100BP04271 92 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 ZNF888P0CJ79 500 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 TFEBP19484 476 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 NCF2P19878 526 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 PRDX6P30041 224 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 RPL14P50914 215 aaKnown RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 AP2B1P63010 937 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 HYAL2Q12891 473 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 DLG1Q12959 904 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 PCOLCEQ15113 449 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 FAAH2Q6GMR7 532 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 RIPOR1Q6ZS17 1223 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 ATCAYQ86WG3 371 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 TMEM151AQ8N4L1 468 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 UTP15Q8TED0 518 aaKnown RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 CREB3L4Q8TEY5 395 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 STON2Q8WXE9 905 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 MRPL57Q9BQC6 102 aaKnown RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 MRPL46Q9H2W6 279 aaKnown RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 XPR1Q9UBH6 696 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 STOML1Q9UBI4 398 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 VTI1BQ9UEU0 232 aa13.63□□□□□ -0.23
COL27A1-203ENST00000468565 C19orf25Q9UFG5 118 aaPredicted RBP13.63□□□□□ -0.23
COL27A1-203ENST00000468565 H0Y3Z8 333 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 KERAO60938 352 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ZIC2O95409 532 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SERPINA7P05543 415 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SMIM10L1P0DMW3 83 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 HSPA7P48741 367 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SLBPQ14493 270 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 MINDY4Q4G0A6 757 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ISLR2Q6UXK2 745 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 Q6ZS92 163 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 LRRC70Q7Z2Q7 622 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 NXNL1Q96CM4 212 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 WDR34Q96EX3 536 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SMIM10Q96HG1 83 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ATOH8Q96SQ7 321 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 EPS8L2Q9H6S3 715 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ALG9Q9H6U8 611 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ZBTB20Q9HC78 741 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ZNF860A6NHJ4 632 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 HDAC3O15379 428 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 PSMG1O95456 288 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 SBK3P0C264 359 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 PRR35P0CG20 571 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 KCNC1P48547 511 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 AGTR2P50052 363 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 INPP5JQ15735 1006 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 PLEKHN1Q494U1 663 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 CRB2Q5IJ48 1285 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 MFSD4BQ5TF39 518 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 ULK2Q8IYT8 1036 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 PLPP5Q8NEB5 264 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 FBXO27Q8NI29 283 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 RHEBL1Q8TAI7 183 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 IMMP1LQ96LU5 166 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 GPR78Q96P69 363 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 LMF1Q96S06 567 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 CD244Q9BZW8 370 aa13.62□□□□□ -0.23
COL27A1-203ENST00000468565 RP1L1Q8IWN7 2480 aaPredicted RBP13.62□□□□□ -0.23
COL27A1-203ENST00000468565 DLX3O60479 287 aa13.61□□□□□ -0.23
COL27A1-203ENST00000468565 NPHS1O60500 1241 aa13.61□□□□□ -0.23
COL27A1-203ENST00000468565 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
COL27A1-203ENST00000468565 ICAM2P13598 275 aa13.61□□□□□ -0.23
COL27A1-203ENST00000468565 SERPINB5P36952 375 aa13.61□□□□□ -0.23
COL27A1-203ENST00000468565 NAGLUP54802 743 aa13.61□□□□□ -0.23
COL27A1-203ENST00000468565 STXBP1P61764 594 aaKnown RBP13.61□□□□□ -0.23
COL27A1-203ENST00000468565 MFAP5Q13361 173 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms