RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 VENTXO95231 258 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 RLN1P04808 185 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 SKILP12757 684 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 FHITP49789 147 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 PEX3P56589 373 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 RPS27AP62979 156 aaKnown RBP3.31□□□□□ -1.88
RBM39-226ENST00000468086 TRA2BP62995 288 aaKnown RBP3.31□□□□□ -1.88
RBM39-226ENST00000468086 CASC4Q6P4E1 433 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 ALKBH5Q6P6C2 394 aaKnown RBP3.31□□□□□ -1.88
RBM39-226ENST00000468086 TRAT1Q6PIZ9 186 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 THNSL1Q8IYQ7 743 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 FAM162AQ96A26 154 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 B3GALT6Q96L58 329 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 INTS14Q96SY0 518 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 EDEM3Q9BZQ6 932 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 LSG1Q9H089 658 aaKnown RBP3.31□□□□□ -1.88
RBM39-226ENST00000468086 ITGA11Q9UKX5 1188 aa3.31□□□□□ -1.88
RBM39-226ENST00000468086 TEX48A0A1B0GUV7 120 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 TMCO5BA8MYB1 307 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 SRPX2O60687 465 aaPredicted RBP3.3□□□□□ -1.88
RBM39-226ENST00000468086 RAD51DO75771 328 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 LY6G6DO95868 133 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 IFNAR1P17181 557 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 CASTP20810 708 aaKnown RBP3.3□□□□□ -1.88
RBM39-226ENST00000468086 BRCC3P46736 316 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 FOLH1Q04609 750 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 PM20D1Q6GTS8 502 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 NEPROQ6NW34 567 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 EXOC4Q96A65 974 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 ZNF274Q96GC6 653 aaPredicted RBP3.3□□□□□ -1.88
RBM39-226ENST00000468086 CDHR1Q96JP9 859 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 RAB9BQ9NP90 201 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 ZNF319Q9P2F9 582 aa3.3□□□□□ -1.88
RBM39-226ENST00000468086 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
RBM39-226ENST00000468086 CCDC162PA2VCL2 907 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 OR5H15A6NDH6 313 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 ZNF724A8MTY0 619 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 HAT1O14929 419 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 PIGRP01833 764 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 FKBP1BP68106 108 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 SCN1BQ07699 218 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 SLC3A1Q07837 685 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 MARC1Q5VT66 337 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 RFWD3Q6PCD5 774 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 PET117Q6UWS5 81 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 ZNF600Q6ZNG1 722 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 MSANTD1Q6ZTZ1 278 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 CYP4V2Q6ZWL3 525 aaPredicted RBP3.29□□□□□ -1.88
RBM39-226ENST00000468086 CACUL1Q86Y37 369 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 PARP8Q8N3A8 854 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 SAMD12Q8N8I0 201 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 ZNRF1Q8ND25 227 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 OR6T1Q8NGN1 323 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 FLVCR1-AS1Q8TAF5 88 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.29□□□□□ -1.88
RBM39-226ENST00000468086 SAP25Q8TEE9 199 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 GANCQ8TET4 914 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 UBLCP1Q8WVY7 318 aaPredicted RBP3.29□□□□□ -1.88
RBM39-226ENST00000468086 IDI2Q9BXS1 227 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.29□□□□□ -1.88
RBM39-226ENST00000468086 MRPL17Q9NRX2 175 aaKnown RBP3.29□□□□□ -1.88
RBM39-226ENST00000468086 SENP1Q9P0U3 644 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 VPS18Q9P253 973 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 ZNF346Q9UL40 294 aaKnown RBP3.29□□□□□ -1.88
RBM39-226ENST00000468086 GPR132Q9UNW8 380 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 TMED7Q9Y3B3 224 aa3.29□□□□□ -1.88
RBM39-226ENST00000468086 HCFC1P51610 2035 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 CROCCQ5TZA2 2017 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 GTPBP10A4D1E9 387 aaKnown RBP3.28□□□□□ -1.88
RBM39-226ENST00000468086 NEDD8-MDP1E9PL57 170 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 TBCAO75347 108 aaKnown RBP3.28□□□□□ -1.88
RBM39-226ENST00000468086 LETM1O95202 739 aaPredicted RBP3.28□□□□□ -1.88
RBM39-226ENST00000468086 FHP07954 510 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 SCG2P13521 617 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 PRKCIP41743 596 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 CCR4P51679 360 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 TTC31Q49AM3 519 aaPredicted RBP3.28□□□□□ -1.88
RBM39-226ENST00000468086 IQCCQ4KMZ1 466 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 PAMR1Q6UXH9 720 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 TMEM64Q6YI46 380 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 AFAP1L1Q8TED9 768 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 ERP27Q96DN0 273 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 RASL10BQ96S79 203 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 ZBP1Q9H171 429 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 NT5DC2Q9H857 520 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 ABCB10Q9NRK6 738 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 ANAPC11Q9NYG5 84 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 DHRS4-AS1Q9P1J3 65 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 SH3GLB1Q9Y371 365 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
RBM39-226ENST00000468086 TRAV34A0A0B4J273 112 aa3.27□□□□□ -1.89
RBM39-226ENST00000468086 ZNF253O75346 499 aa3.27□□□□□ -1.89
RBM39-226ENST00000468086 CSDE1O75534 798 aaKnown RBP3.27□□□□□ -1.89
RBM39-226ENST00000468086 HSP90AA1P07900 732 aaKnown RBP3.27□□□□□ -1.89
RBM39-226ENST00000468086 LYNP07948 512 aa3.27□□□□□ -1.89
RBM39-226ENST00000468086 UMPSP11172 480 aa3.27□□□□□ -1.89
RBM39-226ENST00000468086 IGLV3-21P80748 117 aaPredicted RBP3.27□□□□□ -1.89
RBM39-226ENST00000468086 AKAP17AQ02040 695 aaKnown RBP3.27□□□□□ -1.89
RBM39-226ENST00000468086 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms