RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 LOXL2Q9Y4K0 774 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 SLC22A7Q9Y694 548 aa6.51□□□□□ -1.37
SCAF4-204ENST00000467731 HYKKA2RU49 373 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PMS2P1A4D2B8 440 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 FAM149AA5PLN7 773 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF860A6NHJ4 632 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 EIF4E1BA6NMX2 242 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 POLR1CO15160 346 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF749O43361 778 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PCDH7O60245 1069 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SERPINB7O75635 380 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 G6PDP11413 515 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 BCKDHAP12694 445 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SDC1P18827 310 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 HIST1H1TP22492 207 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TACR1P25103 407 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 BTN3A2P78410 334 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TGM3Q08188 693 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 HERC3Q15034 1050 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SPRED3Q2MJR0 410 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SMU1Q2TAY7 513 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ANKDD1AQ495B1 522 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TTLL10Q6ZVT0 673 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PAGE2Q7Z2X7 111 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 MTDHQ86UE4 582 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PDSS2Q86YH6 399 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CACNA2D3Q8IZS8 1091 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 LIX1Q8N485 282 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ANKS4BQ8N8V4 417 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ACOT4Q8N9L9 421 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TTC29Q8NA56 475 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CLHC1Q8NHS4 586 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PMEPA1Q969W9 287 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SLC45A3Q96JT2 553 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 EGLN2Q96KS0 407 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 FCRL1Q96LA6 429 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TBCDQ9BTW9 1192 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 DDX31Q9H8H2 851 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 COPS7BQ9H9Q2 264 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ENAMQ9NRM1 1142 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CUTCQ9NTM9 273 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 IL20Q9NYY1 176 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 AKAP7Q9P0M2 348 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 DHCR7Q9UBM7 475 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NAALAD2Q9Y3Q0 740 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 FRYQ5TBA9 3013 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SDK2Q58EX2 2172 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 A0A1W2PNU3 283 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 DCDC2BA2VCK2 349 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TMX2-CTNND1H3BSU7 103 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 FOXS1O43638 330 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ANXA4P09525 319 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ALAS2P22557 587 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ATP5A1P25705 553 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ETV5P41161 510 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TSFMP43897 325 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 GCGRP47871 477 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ARFIP1P53367 373 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NME5P56597 212 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 FAM53BQ14153 422 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 IL11RAQ14626 422 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NDUFA5Q16718 116 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NDUFA9Q16795 377 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CNPY1Q3B7I2 92 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CCNYL2Q5T2Q4 361 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 C6orf183Q5T699 404 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 GARNL3Q5VVW2 1013 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 METTL21CQ5VZV1 264 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 PWWP2BQ6NUJ5 590 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 CYP20A1Q6UW02 462 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SPATA19Q7Z5L4 167 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM126BQ8IUX1 230 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 METTL27Q8N6F8 245 aaPredicted RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 OR9A4Q8NGU2 314 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 ITPKCQ96DU7 683 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 TSSK3Q96PN8 268 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NDC1Q9BTX1 674 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 AIG1Q9NVV5 245 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 SIRT5Q9NXA8 310 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 EIF3LQ9Y262 564 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
SCAF4-204ENST00000467731 COPG1Q9Y678 874 aaKnown RBP6.5□□□□□ -1.37
SCAF4-204ENST00000467731 A0A088AWK7 358 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 A0A0A6YYC8 382 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 A0A0A6YYD5 115 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ARHGAP10A1A4S6 786 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 I3L1I5 382 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SGK494L7N484 410 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 GALR3O60755 368 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SCRG1O75711 98 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MYO1DO94832 1006 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 KLHL18O94889 574 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SCELO95171 688 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 JMJD7P0C870 316 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FGF5P12034 268 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ACPPP15309 386 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ACADSP16219 412 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF10P21506 573 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms