RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 GRHL1Q9NZI5 618 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 PTBP2Q9UKA9 531 aaKnown RBP16.32■□□□□ 0.2
COL7A1-206ENST00000466591 ACOT9Q9Y305 439 aa16.32■□□□□ 0.2
COL7A1-206ENST00000466591 MYO7BQ6PIF6 2116 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 UBXN8O00124 270 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 WWP2O00308 870 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 SAP18O00422 153 aaKnown RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ZNHIT1O43257 154 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 KERAO60938 352 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 LDB3O75112 727 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 FAM155BO75949 473 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 AGAP20933 346 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TLX1P31314 330 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 PTGER1P34995 402 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ZKSCAN8Q15776 578 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TBCCQ15814 346 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 FAM83EQ2M2I3 478 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 SYT10Q6XYQ8 523 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 Q6ZPB1 254 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 SIAH3Q8IW03 269 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TEX9Q8N6V9 391 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ACOT4Q8N9L9 421 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 MORN4Q8NDC4 146 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 PSD4Q8NDX1 1056 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TMEM52Q8NDY8 209 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 FBXO25Q8TCJ0 367 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 MTFMTQ96DP5 389 aaKnown RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 CMTM7Q96FZ5 175 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 QRFPRQ96P65 431 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 DGAT2Q96PD7 388 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 MCMBPQ9BTE3 642 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TRIM45Q9H8W5 580 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ACTR8Q9H981 624 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 LIN28AQ9H9Z2 209 aaKnown RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF490Q9ULM2 529 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF835Q9Y2P0 537 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 TEX15Q9BXT5 2789 aa16.31■□□□□ 0.2
COL7A1-206ENST00000466591 A0A087X1B8 175 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 A0A1B0GTH9 108 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 E9PLN8 166 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 RTCAO00442 366 aaKnown RBP16.3■□□□□ 0.2
COL7A1-206ENST00000466591 WISP2O76076 250 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 PDE9AO76083 593 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 HIST1H1TP22492 207 aaPredicted RBP16.3■□□□□ 0.2
COL7A1-206ENST00000466591 GPX6P59796 221 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 ADORA2A-AS1P86434 159 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 ID2Q02363 134 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 VN1R5Q7Z5H4 357 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 CCDC91Q7Z6B0 441 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 CD163Q86VB7 1156 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 REPS1Q96D71 796 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 WDR34Q96EX3 536 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 UBXN10Q96LJ8 280 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 VKORC1Q9BQB6 163 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 MS4A8Q9BY19 250 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 MYOTQ9UBF9 498 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 ADGRE2Q9UHX3 823 aa16.3■□□□□ 0.2
COL7A1-206ENST00000466591 CYR61O00622 381 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 WISP3O95389 354 aaPredicted RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 SLC35E2BP0CK96 405 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 PRF1P14222 555 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 ATP5A1P25705 553 aaKnown RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 BUD31P41223 144 aaPredicted RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 GPR143P51810 404 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 CBLBQ13191 982 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 SLAMF1Q13291 335 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 RNFT1Q5M7Z0 435 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 MROH9Q5TGP6 573 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 KHDRBS2Q5VWX1 349 aaKnown RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 ARHGAP11AQ6P4F7 1023 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 CYP20A1Q6UW02 462 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 C16orf47Q6ZP98 133 aaPredicted RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 GK5Q6ZS86 529 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 CEP128Q6ZU80 1094 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 MDGA2Q7Z553 956 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 ISCA2Q86U28 154 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 SLC22A16Q86VW1 577 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 DOLPP1Q86YN1 238 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 SLC2A12Q8TD20 617 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 CHTF18Q8WVB6 975 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 ATP6V1E2Q96A05 226 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 RGMAQ96B86 450 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 RBM18Q96H35 190 aaKnown RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 DEFB127Q9H1M4 99 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 OR51B5Q9H339 312 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 EXO5Q9H790 373 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 MS4A12Q9NXJ0 267 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 CPSF2Q9P2I0 782 aaKnown RBP16.29■□□□□ 0.2
COL7A1-206ENST00000466591 VTI1BQ9UEU0 232 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 PHF11Q9UIL8 331 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 IKBKGQ9Y6K9 419 aa16.29■□□□□ 0.2
COL7A1-206ENST00000466591 FAM166BA8MTA8 275 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 TGFBR3LH3BV60 316 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms