RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 DRAXINQ8NBI3 349 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-209ENST00000466222 OR52E4Q8NGH9 312 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 DNAJB8Q8NHS0 232 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 VPS50Q96JG6 964 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TSSK3Q96PN8 268 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 SH3GL1Q99961 368 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 NPLQ9BXD5 320 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-209ENST00000466222 MS4A8Q9BY19 250 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 TRIM8Q9BZR9 551 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 OCEL1Q9H607 264 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 GORASP2Q9H8Y8 452 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 SLAMF8Q9P0V8 285 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 PCDHGA4Q9Y5G9 962 aa17.7■□□□□ 0.42
CAPN3-209ENST00000466222 IGHV1OR21-1A0A087WYE8 117 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 A0A0J9YY10 115 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 SLC9B1P1A6NJY1 282 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 C4orf51C9J302 202 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 NDUFS4O43181 175 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 CER1O95813 267 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 SYPP08247 313 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 HSD3B1P14060 373 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 SDC1P18827 310 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 HSD3B2P26439 372 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 ALDH3A2P51648 485 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 CHRNB3Q05901 458 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 ZNF33BQ06732 778 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 SF3A2Q15428 464 aaKnown RBP17.69■□□□□ 0.42
CAPN3-209ENST00000466222 COMMD6Q7Z4G1 85 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 VN1R4Q7Z5H5 301 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 AVL9Q8NBF6 648 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 BAHD1Q8TBE0 780 aaPredicted RBP17.69■□□□□ 0.42
CAPN3-209ENST00000466222 MAGEE2Q8TD90 523 aaPredicted RBP17.69■□□□□ 0.42
CAPN3-209ENST00000466222 CCDC74AQ96AQ1 378 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 ISOC1Q96CN7 298 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 FBXL20Q96IG2 436 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 RNF145Q96MT1 663 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 DOK1Q99704 481 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 NT5DC2Q9H857 520 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 RAB23Q9ULC3 237 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 CACNA1HO95180 2353 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 CFAP54Q96N23 3096 aa17.69■□□□□ 0.42
CAPN3-209ENST00000466222 TNRC6BQ9UPQ9 1833 aaKnown RBP17.69■□□□□ 0.42
CAPN3-209ENST00000466222 PLPP1O14494 284 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KHNYNO15037 678 aaKnown RBP17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KLHL18O94889 574 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 LRATO95237 230 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 CDH3P22223 829 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 PTX3P26022 381 aaPredicted RBP17.68■□□□□ 0.42
CAPN3-209ENST00000466222 HLCSP50747 726 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 PLA2G16P53816 162 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 ACSM2AQ08AH3 577 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 TCF15Q12870 199 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DEFB110Q30KQ9 67 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 PERM1Q5SV97 790 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KHDRBS2Q5VWX1 349 aaKnown RBP17.68■□□□□ 0.42
CAPN3-209ENST00000466222 ACSM2BQ68CK6 577 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 UBE3DQ7Z6J8 389 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 AMER3Q8N944 861 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 LOXL4Q96JB6 756 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 OR2A5Q96R48 311 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 SEPHS2Q99611 448 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DUSP23Q9BVJ7 150 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 PILRAQ9UKJ1 303 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 TSC22D4Q9Y3Q8 395 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 GMEB1Q9Y692 573 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 LRIT2A6NDA9 550 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 NPIPB8E9PQR5 432 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DFNA5O60443 496 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KLK1P06870 262 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DCKP27707 260 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DAG1Q14118 895 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DEPDC1Q5TB30 811 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KLHL35Q6PF15 583 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 DTWD1Q8N5C7 304 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 MFSD9Q8NBP5 474 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 KCT2Q8NC54 265 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 PRSS33Q8NF86 280 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 CDC26Q8NHZ8 85 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 SLC13A3Q8WWT9 602 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 LRFN3Q9BTN0 628 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 SARGQ9BW04 601 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 LHX9Q9NQ69 397 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 AP1M2Q9Y6Q5 423 aa17.68■□□□□ 0.42
CAPN3-209ENST00000466222 IGHV5-51A0A0C4DH38 117 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 ALPPL2P10696 532 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 CD1CP29017 333 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 CSF2RBP32927 897 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 ARSFP54793 590 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 CACHD1Q5VU97 1274 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 TMPRSS9Q7Z410 1059 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 SUMF1Q8NBK3 374 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 SDCCAG3Q96C92 435 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 AHCYL2Q96HN2 611 aaKnown RBP17.67■□□□□ 0.42
CAPN3-209ENST00000466222 ZNF717Q9BY31 904 aaPredicted RBP17.67■□□□□ 0.42
CAPN3-209ENST00000466222 PITHD1Q9GZP4 211 aaPredicted RBP17.67■□□□□ 0.42
CAPN3-209ENST00000466222 REXO4Q9GZR2 422 aaKnown RBP17.67■□□□□ 0.42
CAPN3-209ENST00000466222 SEMA6CQ9H3T2 930 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 CXorf21Q9HAI6 301 aa17.67■□□□□ 0.42
CAPN3-209ENST00000466222 PCDHGA5Q9Y5G8 931 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms