RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ECSCRQ19T08 205 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 AGAP7PQ5VUJ5 663 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 ALKBH5Q6P6C2 394 aaKnown RBP4.67□□□□□ -1.66
PTCD3-205ENST00000464541 GBP6Q6ZN66 633 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 TIPARPQ7Z3E1 657 aaKnown RBP4.67□□□□□ -1.66
PTCD3-205ENST00000464541 BANPQ8N9N5 519 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 CLEC1AQ8NC01 280 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 GANCQ8TET4 914 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 LRRCC1Q9C099 1032 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 ZNF350Q9GZX5 532 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 MED17Q9NVC6 651 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 STYXL1Q9Y6J8 313 aa4.67□□□□□ -1.66
PTCD3-205ENST00000464541 IGHV3-16A0A0C4DH30 117 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 C13orf42A0A1B0GVH6 325 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 GPRIN2O60269 458 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 SH3BGRLO75368 114 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 GLCEO94923 617 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 GLULP15104 373 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 SLC1A6P48664 564 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 FHITP49789 147 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 SNU13P55769 128 aaKnown RBP4.66□□□□□ -1.66
PTCD3-205ENST00000464541 ASIC1P78348 528 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 KBTBD12Q3ZCT8 623 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 FUT11Q495W5 492 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 LYPLAL1Q5VWZ2 237 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 ARMC3Q5W041 872 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 TMEM64Q6YI46 380 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 LRRC49Q8IUZ0 686 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 AQP12AQ8IXF9 295 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 CLYBLQ8N0X4 340 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
PTCD3-205ENST00000464541 ZNF274Q96GC6 653 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-205ENST00000464541 ANKRD27Q96NW4 1050 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 TNFRSF13CQ96RJ3 184 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 MARCH7Q9H992 704 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 PLEKHA3Q9HB20 300 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 ITM2BQ9Y287 266 aa4.66□□□□□ -1.66
PTCD3-205ENST00000464541 TRBV5-4A0A0C4DH59 114 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 IGLON5A6NGN9 336 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 SYT7O43581 403 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 CRCPO75575 148 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 ANPEPP15144 967 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 SLC1A4P43007 532 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 MFGE8Q08431 387 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-205ENST00000464541 NFE2L1Q14494 772 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 CDC37Q16543 378 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-205ENST00000464541 SIGLEC15Q6ZMC9 328 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 C17orf64Q86WR6 236 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 CACUL1Q86Y37 369 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 LINC00612Q8N6U2 182 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 ZDHHC6Q9H6R6 413 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF665Q9H7R5 613 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 ABCB8Q9NUT2 735 aa4.65□□□□□ -1.67
PTCD3-205ENST00000464541 NIP7Q9Y221 180 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTCD3-205ENST00000464541 TP53BP1Q12888 1972 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-205ENST00000464541 SRRM4A7MD48 611 aaKnown RBP4.64□□□□□ -1.67
PTCD3-205ENST00000464541 CSDE1O75534 798 aaKnown RBP4.64□□□□□ -1.67
PTCD3-205ENST00000464541 PRDM1O75626 825 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 OR6B1O95007 311 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 PDGFBP01127 241 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-205ENST00000464541 GSTA2P09210 222 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 ODC1P11926 461 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 SKILP12757 684 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 BCL3P20749 454 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 PPP2R1AP30153 589 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 GSK3BP49841 420 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 KHKP50053 298 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 CSRP3P50461 194 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 GABPAQ06546 454 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 CCDC158Q5M9N0 1113 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 EMBQ6PCB8 327 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 GET4Q7L5D6 327 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-205ENST00000464541 BEST4Q8NFU0 473 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 FIBINQ8TAL6 211 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 GDAP1Q8TB36 358 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 ULK4Q96C45 1275 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 RCHY1Q96PM5 261 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 ZNF581Q9P0T4 197 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 TP53TG3Q9ULZ0 132 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 ERVK-19Q9WJR5 959 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 SH3GLB1Q9Y371 365 aa4.64□□□□□ -1.67
PTCD3-205ENST00000464541 AGRNO00468 2067 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 ATP6AP2A0A1C7CYW4 349 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 A4D1N5 150 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 OR5H15A6NDH6 313 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 TMCO5BA8MYB1 307 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 FRAT2O75474 233 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 RENP00797 406 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 MT-ND1P03886 318 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 LYNP07948 512 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 SPRP35270 261 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 ELK3P41970 407 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 YWHAHQ04917 246 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 PEX6Q13608 980 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 MEF2DQ14814 521 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 VWA2Q5GFL6 755 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 SEL1L3Q68CR1 1132 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 SNRNP48Q6IEG0 339 aaKnown RBP4.63□□□□□ -1.67
PTCD3-205ENST00000464541 NEPROQ6NW34 567 aa4.63□□□□□ -1.67
PTCD3-205ENST00000464541 NUFIP2Q7Z417 695 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms