RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 PCNX3Q9H6A9 2034 aa3.32□□□□□ -1.88
PTPN12-210ENST00000464313 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 IQCMA0A1B0GVH7 501 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ATP6AP2A0A1C7CYW4 349 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 TMEM129A0AVI4 362 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 SLC15A5A6NIM6 579 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ARHGEF33A8MVX0 844 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 CACNB4O00305 520 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 PSMD3O43242 534 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 KINO60870 393 aaKnown RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 FGF19O95750 216 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 PCP11498 1178 aaKnown RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 FCGR2BP31994 310 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 FCGR2CP31995 323 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ID1P41134 155 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ERVK-16P61578 105 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 RBBP4Q09028 425 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 MORF4L2Q15014 288 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 RFTN2Q52LD8 501 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 TEX35Q5T0J7 233 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ZNF730Q6ZMV8 503 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 CARM1Q86X55 608 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 SERPINA12Q8IW75 414 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 OR4N5Q8IXE1 308 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ZNF444Q8N0Y2 327 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 C8orf46Q8TAG6 207 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 KRT35Q92764 455 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 HAS2Q92819 552 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 PCED1BQ96HM7 432 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 SOSTQ9BQB4 213 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 NAPBQ9H115 298 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ZDHHC6Q9H6R6 413 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 VIPAS39Q9H9C1 493 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 AKIRIN1Q9H9L7 192 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 WDR41Q9HAD4 459 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 DNAJC11Q9NVH1 559 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 PLEK2Q9NYT0 353 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 UBQLN2Q9UHD9 624 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 KLK13Q9UKR3 277 aa3.31□□□□□ -1.88
PTPN12-210ENST00000464313 ZNF346Q9UL40 294 aaKnown RBP3.31□□□□□ -1.88
PTPN12-210ENST00000464313 LOC390937A0A1W2PQ73 354 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 OR5H15A6NDH6 313 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 K7EQG2 157 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 TRAFD1O14545 582 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 RTN2O75298 545 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 CSO75390 466 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 GAS8O95995 478 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 ANPEPP15144 967 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 GPX3P22352 226 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 OAS2P29728 719 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 UCP2P55851 309 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 KIAA1024LP59773 190 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 RAPSNQ13702 412 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 GIT2Q14161 759 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 LASP1Q14847 261 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 SIX1Q15475 284 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 STXBP2Q15833 593 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 WSCD2Q2TBF2 565 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 FUT11Q495W5 492 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 DCAF12Q5T6F0 453 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 SNRNP48Q6IEG0 339 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 CAPN13Q6MZZ7 669 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 PRSS42Q7Z5A4 293 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 SLC47A2Q86VL8 602 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 ZNF713Q8N859 430 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 NAT8LQ8N9F0 302 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 NPRL2Q8WTW4 380 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 PRCCQ92733 491 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 NABP1Q96AH0 204 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 PDLIM5Q96HC4 596 aaKnown RBP3.3□□□□□ -1.88
PTPN12-210ENST00000464313 TAAR6Q96RI8 345 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 GAL3ST4Q96RP7 486 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 SSX3Q99909 188 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 AGPAT1Q99943 283 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 CHCHD5Q9BSY4 110 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 TUBB1Q9H4B7 451 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 MIS18AQ9NYP9 233 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 EXOC7Q9UPT5 735 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 KCNK6Q9Y257 313 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 EXOC6BQ9Y2D4 811 aa3.3□□□□□ -1.88
PTPN12-210ENST00000464313 TRGV8A0A0C4DH27 118 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 A0A1W2PPR1 153 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 SH3PXD2BA1X283 911 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 SHISA9B4DS77 424 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 GMNNO75496 209 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 CPNE6O95741 557 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 HPRP00739 348 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 EPOP01588 193 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 GLRA1P23415 457 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 FHITP49789 147 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 CRYBA2P53672 197 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 KCNK10P57789 538 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 MFGE8Q08431 387 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-210ENST00000464313 COX10Q12887 443 aa3.29□□□□□ -1.88
PTPN12-210ENST00000464313 GK2Q14410 553 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms