RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 C18orf63Q68DL7 685 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 FOXR1Q6PIV2 292 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF517Q6ZMY9 492 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-202ENST00000463060 COX15Q7KZN9 410 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 MARCH9Q86YJ5 346 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 GALNT15Q8N3T1 639 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 OR7A2PQ8NGA2 310 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 CSF3RQ99062 836 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF304Q9HCX3 659 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 ARL8BQ9NVJ2 186 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 EHD3Q9NZN3 535 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 CCDC167Q9P0B6 97 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 CAPN7Q9Y6W3 813 aa13.54□□□□□ -0.24
COL6A1-202ENST00000463060 C1orf226A1L170 272 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 C9JVG2 144 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 FAM227AF5H4B4 570 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 MEN1O00255 615 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 CPNE3O75131 537 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 JMJD7P0C870 316 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 RNH1P13489 461 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 WNT3P56703 355 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 MAT1AQ00266 395 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 TNFRSF17Q02223 184 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 ABHD18Q0P651 414 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 CAMK2BQ13554 666 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 TLR1Q15399 786 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 SYT16Q17RD7 645 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 C1orf189Q5VU69 101 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 LCN10Q6JVE6 187 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 IGF2-ASQ6U949 168 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 TMEM52Q8NDY8 209 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 OR8J2Q8NGG1 315 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 OR51Q1Q8NH59 317 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 RP9Q8TA86 221 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 DNAJB14Q8TBM8 379 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-202ENST00000463060 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 PISDQ9UG56 409 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 MAU2Q9Y6X3 613 aa13.53□□□□□ -0.24
COL6A1-202ENST00000463060 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 ASPDHA6ND91 283 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 FBP2O00757 339 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 NVLO15381 856 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 PRKRAO75569 313 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 KIAA0754O94854 1291 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 BMP10O95393 424 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DLGAP3O95886 979 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 IL6P05231 212 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 LAMP1P11279 417 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 COX4I1P13073 169 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 CAPN3P20807 821 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 CPN2P22792 545 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 RPL3P39023 403 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 FRKP42685 505 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DGKQP52824 942 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 MAPK10P53779 464 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DCDP81605 110 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 CEBPEQ15744 281 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DPY19L1Q2PZI1 675 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 NKAIN1Q4KMZ8 207 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 C3orf38Q5JPI3 329 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 SPANXN4Q5MJ08 99 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 GK5Q6ZS86 529 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 R3HCC1LQ7Z5L2 792 aaKnown RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 METTL27Q8N6F8 245 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 FAM47BQ8NA70 645 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 ADAMTS18Q8TE60 1221 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 STARD8Q92502 1023 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 CLIP3Q96DZ5 547 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 RNF31Q96EP0 1072 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 ZNF681Q96N22 645 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 SLC46A1Q96NT5 459 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DPH2Q9BQC3 489 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-202ENST00000463060 FAIM2Q9BWQ8 316 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 LANCL2Q9NS86 450 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 ERVK-11Q9UQG0 969 aa13.52□□□□□ -0.25
COL6A1-202ENST00000463060 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
COL6A1-202ENST00000463060 LOC100653049A0A140TA62 436 aa13.51□□□□□ -0.25
COL6A1-202ENST00000463060 A0A1W2PP18 115 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms