RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 RUNX2Q13950 521 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 RBBP5Q15291 538 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 HSPB2Q16082 182 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 DEFB113Q30KQ7 82 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 FBXL19-AS1Q494R0 122 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 RBM20Q5T481 1227 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 FAM47EQ6ZV65 393 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 TMPRSS11BQ86T26 416 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ZNF595Q8IYB9 648 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 RELL2Q8NC24 303 aaPredicted RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 MORN4Q8NDC4 146 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 DAZLQ92904 295 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 LRRC46Q96FV0 321 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 FAR2Q96K12 515 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 C18orf12Q96KH6 178 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 SIGLEC10Q96LC7 697 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 SMR3AQ99954 134 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 CNPPD1Q9BV87 410 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 ALKBH4Q9NXW9 302 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 TUBA8Q9NY65 449 aaPredicted RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 SPRR3Q9UBC9 169 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 GUCA1BQ9UMX6 200 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 MRPS33Q9Y291 106 aaKnown RBP10.03□□□□□ -0.8
CBX3-205ENST00000462165 ATG4BQ9Y4P1 393 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 CLCA3PQ9Y6N3 262 aa10.03□□□□□ -0.8
CBX3-205ENST00000462165 NINQ8N4C6 2090 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 TRGV5A0A0B4J1U4 118 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 GOLGA8MH3BSY2 632 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 CYR61O00622 381 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 NRDCO43847 1150 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 GUCA1CO95843 209 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 KRT14P02533 472 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 P04436 131 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 CCL3P10147 92 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 SAT1P21673 171 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 GABRB3P28472 473 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 HNRNPH1P31943 449 aaKnown RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 OPN5Q6U736 354 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 SBSNQ6UWP8 590 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 SEM1Q6ZVN7 128 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 CLNKQ7Z7G1 428 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 THOC6Q86W42 341 aaKnown RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 FBXW8Q8N3Y1 598 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 ZNF321PQ8N8H1 164 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 OR14A16Q8NHC5 309 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 PTPMT1Q8WUK0 201 aaPredicted RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 RNASE6Q93091 150 aaKnown RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 MS4A6EQ96DS6 147 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 QRFPRQ96P65 431 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 VTI1BQ9UEU0 232 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 FOXD3Q9UJU5 478 aaPredicted RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 SLC22A14Q9Y267 594 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 KCNE2Q9Y6J6 123 aa10.02□□□□□ -0.81
CBX3-205ENST00000462165 ANK3Q12955 4377 aaKnown RBP10.02□□□□□ -0.81
CBX3-205ENST00000462165 A0A088AWK7 358 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 A0A0G2JN53 185 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 LRIT2A6NDA9 550 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 DVL2O14641 736 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ERI3O43414 337 aaKnown RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 B3GALT2O43825 422 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 CTNSO60931 367 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 AHSGP02765 367 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 IFNA16P05015 189 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 INHBBP09529 407 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 CCDC175P0C221 793 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 EPXP11678 715 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ZNF10P21506 573 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 BMP5P22003 454 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 TACR1P25103 407 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 GSTM2P28161 218 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ADSLP30566 484 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 CEACAM8P31997 349 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 LIM2P55344 173 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 RNF4P78317 190 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 KEAP1Q14145 624 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 PPP1R3AQ16821 1122 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 POMZP3Q6PJE2 187 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 TAOK1Q7L7X3 1001 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 GALNT7Q86SF2 657 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 CNTN4Q8IWV2 1026 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.01□□□□□ -0.81
CBX3-205ENST00000462165 KLHDC8AQ8IYD2 350 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ULK2Q8IYT8 1036 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 FAM47BQ8NA70 645 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 NAXEQ8NCW5 288 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 TTLQ8NG68 377 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 OR5L2Q8NGL0 311 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 GABPB2Q8TAK5 448 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 ARSGQ96EG1 525 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 PDLIM5Q96HC4 596 aaKnown RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 SERINC2Q96SA4 455 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 OR8D2Q9GZM6 311 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 EXO5Q9H790 373 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 PLEKHF2Q9H8W4 249 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 SH2D2AQ9NP31 389 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms