RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ZNF835Q9Y2P0 537 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 CLCA3PQ9Y6N3 262 aa17.65■□□□□ 0.42
VARS-220ENST00000461874 ASNA1O43681 348 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 KLK8O60259 260 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 PRKNO60260 465 aaPredicted RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 ZFAND5O76080 213 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 ALDOAP04075 364 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 IFNA16P05015 189 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 HIST1H1TP22492 207 aaPredicted RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 TYK2P29597 1187 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 STX4Q12846 297 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 C3AR1Q16581 482 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 PFKFB4Q16877 469 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 RNFT1Q5M7Z0 435 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 DEPDC1Q5TB30 811 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 KHDRBS2Q5VWX1 349 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 MTFR2Q6P444 385 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 CEP128Q6ZU80 1094 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 SPPL2CQ8IUH8 684 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 SLC34A3Q8N130 599 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 MMGT1Q8N4V1 131 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 TMEM156Q8N614 296 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 CPSF7Q8N684 471 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 HUS1BQ8NHY5 278 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 DAZLQ92904 295 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 MAGED4Q96JG8 741 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 FUT8Q9BYC5 575 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 OR51B5Q9H339 312 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 MTRF1LQ9UGC7 380 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 DMGDHQ9UI17 866 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 SH3BGRL2Q9UJC5 107 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 KLF13Q9Y2Y9 288 aaPredicted RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 YARS2Q9Y2Z4 477 aaKnown RBP17.64■□□□□ 0.41
VARS-220ENST00000461874 TSC22D4Q9Y3Q8 395 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 ANGPTL3Q9Y5C1 460 aa17.64■□□□□ 0.41
VARS-220ENST00000461874 PCNX1Q96RV3 2341 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 MYOCOSA0A1B0GUC4 107 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 TMEM200CA6NKL6 621 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 SAP18O00422 153 aaKnown RBP17.63■□□□□ 0.41
VARS-220ENST00000461874 LDB3O75112 727 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 GFAPP14136 432 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 ZNF24P17028 368 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 PIK3CBP42338 1070 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 SSR2P43308 183 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 SERPINB8P50452 374 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 ALDH18A1P54886 795 aaKnown RBP17.63■□□□□ 0.41
VARS-220ENST00000461874 SERTAD2Q14140 314 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 PCBP2Q15366 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
VARS-220ENST00000461874 LIPJQ5W064 366 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 KLC3Q6P597 504 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 Q6ZPB1 254 aaPredicted RBP17.63■□□□□ 0.41
VARS-220ENST00000461874 SULF2Q8IWU5 870 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 CYP4Z2PQ8N1L4 340 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 POGLUT1Q8NBL1 392 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 MORN4Q8NDC4 146 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 OR14A16Q8NHC5 309 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 TINAGQ9UJW2 476 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 ENTPD4Q9Y227 616 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 SPACA6W5XKT8 324 aa17.63■□□□□ 0.41
VARS-220ENST00000461874 LRRC14BA6NHZ5 514 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 KLRC4-KLRK1H3BQV0 150 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 CPN2P22792 545 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 SSR4P51571 173 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 ART3Q13508 389 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 DDX39BQ13838 428 aaKnown RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 OR4C11Q6IEV9 310 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 RPTNQ6XPR3 784 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 HSDL2Q6YN16 418 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 C16orf47Q6ZP98 133 aaPredicted RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 MDGA2Q7Z553 956 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 MRGPRGQ86SM5 289 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 MYLK4Q86YV6 388 aaPredicted RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 GHDCQ8N2G8 530 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 RNF175Q8N4F7 328 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 ZNF808Q8N4W9 903 aaPredicted RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 NOA1Q8NC60 698 aaKnown RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 SLC44A1Q8WWI5 657 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 RGMAQ96B86 450 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 ANKRD9Q96BM1 317 aaPredicted RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 SORBS1Q9BX66 1292 aaKnown RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 TSPYL1Q9H0U9 437 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 VPS11Q9H270 941 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 CDC42EP4Q9H3Q1 356 aaKnown RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 ACTR8Q9H981 624 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 LIN28AQ9H9Z2 209 aaKnown RBP17.62■□□□□ 0.41
VARS-220ENST00000461874 DMRT3Q9NQL9 472 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 MYOTQ9UBF9 498 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 PCDHGA11Q9Y5H2 935 aa17.62■□□□□ 0.41
VARS-220ENST00000461874 CREBBPQ92793 2442 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 C17orf105B2RV13 164 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 PRSS44E7EML9 344 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 H0YIV9 168 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 PEX1O43933 1283 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 UGDHO60701 494 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 OR2J2O76002 312 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 ACSL3O95573 720 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 TNNI3P19429 210 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 MEOX1P50221 254 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 ID2Q02363 134 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms