RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 CLCA3PQ9Y6N3 262 aa12.7□□□□□ -0.38
PABPC4-208ENST00000461578 RTTNQ86VV8 2226 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 CLCA1A8K7I4 914 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 GOLGA8MH3BSY2 632 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 RFPL3SP0C7P2 107 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 EPXP11678 715 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 CD53P19397 219 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 TRPC1P48995 793 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 AGFG1P52594 562 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 PGGT1BP53609 377 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 HSD17B7P56937 341 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 RAB38P57729 211 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 HYAL4Q2M3T9 481 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 TMEM132CQ8N3T6 1108 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 CCT6BQ92526 530 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 CSF3RQ99062 836 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 DYRK1BQ9Y463 629 aa12.69□□□□□ -0.38
PABPC4-208ENST00000461578 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.69□□□□□ -0.38
PABPC4-208ENST00000461578 FAM171A2A8MVW0 826 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 ERI3O43414 337 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 SERPINA6P08185 405 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 CDKN2DP55273 166 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 RNF4P78317 190 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 ELAVL1Q15717 326 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 PRAMEF20Q5VT98 475 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 SHEQ5VZ18 495 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 DRICH1Q6PGQ1 229 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 OPN5Q6U736 354 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 CXXC5Q7LFL8 322 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 CIARTQ8N365 385 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 LIX1Q8N485 282 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 CALML6Q8TD86 181 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 PTPMT1Q8WUK0 201 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 FBXL8Q96CD0 374 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 JSRP1Q96MG2 331 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 RUNDC3BQ96NL0 473 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 EPB41L4BQ9H329 900 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 ZNF703Q9H7S9 590 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 PELI2Q9HAT8 420 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 BEX4Q9NWD9 120 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 TAS2R13Q9NYV9 303 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
PABPC4-208ENST00000461578 MAD1L1Q9Y6D9 718 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
PABPC4-208ENST00000461578 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 EEF1E1-BLOC1S5C9J1V9 151 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 H7C1Q1 480 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 LRATO95237 230 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 TNNI3P19429 210 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 HNRNPH1P31943 449 aaKnown RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ZNF136P52737 540 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 PLA2G16P53816 162 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 STXBP1P61764 594 aaKnown RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 KCNJ2P63252 427 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ASPHQ12797 758 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 GPS1Q13098 491 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 FBXL19-AS1Q494R0 122 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 Q5PR19 223 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 THOC6Q86W42 341 aaKnown RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 KLHDC8AQ8IYD2 350 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 NEIL3Q8TAT5 605 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 TRIM54Q9BYV2 358 aa12.67□□□□□ -0.38
PABPC4-208ENST00000461578 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
PABPC4-208ENST00000461578 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 MAGEB16A2A368 324 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 C17orf105B2RV13 164 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 B3GALT2O43825 422 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 IL2RAP01589 272 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 CERS1P27544 350 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 CEACAM8P31997 349 aaPredicted RBP12.66□□□□□ -0.38
PABPC4-208ENST00000461578 AP1S2P56377 157 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 ID2Q02363 134 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 STX4Q12846 297 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 SLC22A10Q63ZE4 541 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 POMZP3Q6PJE2 187 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 MAATS1Q7Z4T9 603 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 KIF18BQ86Y91 864 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms