RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 TOR3AQ9H497 397 aa8.9□□□□□ -0.98
NUDCD3-203ENST00000460110 DCAF13Q9NV06 445 aaKnown RBP8.9□□□□□ -0.98
NUDCD3-203ENST00000460110 HEBP2Q9Y5Z4 205 aa8.9□□□□□ -0.98
NUDCD3-203ENST00000460110 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
NUDCD3-203ENST00000460110 ZNF780BQ9Y6R6 833 aa8.9□□□□□ -0.98
NUDCD3-203ENST00000460110 OR2W5A6NFC9 320 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 FOXE1O00358 373 aaPredicted RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 GPR37L1O60883 481 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 CYP7B1O75881 506 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 BMP2P12643 396 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 NR4A1P22736 598 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 ELK4P28324 431 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 RPL3P39023 403 aaKnown RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 DSTNP60981 165 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 ESRRGP62508 458 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 VLDLRP98155 873 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 TGM3Q08188 693 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 DAG1Q14118 895 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 PPP4R4Q6NUP7 873 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 GPR153Q6NV75 609 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 USP30Q70CQ3 517 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 PTRH1Q86Y79 214 aaKnown RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 LAS2Q8IYD9 372 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 GALNT15Q8N3T1 639 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 ARL10Q8N8L6 244 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 Q8N9G6 341 aaPredicted RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 TM4SF18Q96CE8 201 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 AHCYL2Q96HN2 611 aaKnown RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 RMI1Q9H9A7 625 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC6A20Q9NP91 592 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 RHBDL2Q9NX52 303 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 SEC14L3Q9UDX4 400 aa8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 MRPS17Q9Y2R5 130 aaKnown RBP8.9□□□□□ -0.99
NUDCD3-203ENST00000460110 LOC105369274A0A096LPK9 316 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 LOC102723532A0A0G2JNH3 316 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 A0A1W2PPV9 198 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 TCRBV5S2A0A599 114 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 SRFP11831 508 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 RRM2P31350 389 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 CCINQ13939 588 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 SMU1Q2TAY7 513 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 OR4N4Q8N0Y3 316 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 OXR1Q8N573 874 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 FBXO15Q8NCQ5 510 aaPredicted RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 OR2L8Q8NGY9 312 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 RSC1A1Q92681 617 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ARSGQ96EG1 525 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 BARD1Q99728 777 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ACTR10Q9NZ32 417 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 SPATA7Q9P0W8 599 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ANKMY1Q9P2S6 941 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 KLF15Q9UIH9 416 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 PSME2Q9UL46 239 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ALPK2Q86TB3 2170 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 LRIT2A6NDA9 550 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 SOX1O00570 391 aaPredicted RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 LDB3O75112 727 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 PKLRP30613 574 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 RAD23AP54725 363 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 STXBP1P61764 594 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 MYBPC1Q00872 1141 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 DYNC1I2Q13409 638 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 SMAD4Q13485 552 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 OR2T5Q6IEZ7 315 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 FAM71E1Q6IPT2 247 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 RBM44Q6ZP01 1051 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 LRRC56Q8IYG6 542 aaPredicted RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ZZZ3Q8IYH5 903 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ADGRF3Q8IZF5 1079 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 KIAA1958Q8N8K9 716 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 OR2T29Q8NH02 315 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 PROX1Q92786 737 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 DGCR6LQ9BY27 220 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 QRSL1Q9H0R6 528 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 EHD1Q9H4M9 534 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 ARMC7Q9H6L4 198 aa8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 EXO1Q9UQ84 846 aaKnown RBP8.89□□□□□ -0.99
NUDCD3-203ENST00000460110 IGKV1-8A0A0C4DH67 115 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 FAM220BPB1ANY3 271 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MAN2B1O00754 1011 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 NT5EP21589 574 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 IGFBP5P24593 272 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 NDUFS1P28331 727 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 RABIFP47224 123 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 DHPSP49366 369 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SRSF5Q13243 272 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 KCNAB2Q13303 367 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ENPP2Q13822 863 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PRSS53Q2L4Q9 553 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 INTS11Q5TA45 600 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 KIAA0895LQ68EN5 471 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PRR23BQ6ZRT6 265 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ASPGQ86U10 573 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MEX3DQ86XN8 651 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ANKFN1Q8N957 763 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZFP90Q8TF47 636 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 OTULINQ96BN8 352 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 TGM7Q96PF1 710 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 KCNC2Q96PR1 638 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms