RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 GLT8D1Q68CQ7 371 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 METAP1DQ6UB28 335 aaPredicted RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 SNX29P2Q8IUI4 249 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 SYNPOQ8N3V7 929 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 SAMD12Q8N8I0 201 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 ELOA3Q8NG57 546 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 CMTM7Q96FZ5 175 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 ZNF416Q9BWM5 594 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 TSSK6Q9BXA6 273 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 ZDHHC6Q9H6R6 413 aa9.4□□□□□ -0.91
UFD1-205ENST00000459854 WDR6Q9NNW5 1121 aaKnown RBP9.4□□□□□ -0.91
UFD1-205ENST00000459854 OIP5O43482 229 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 PAGE1O75459 146 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SOX30O94993 753 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 GOT2P00505 430 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 GLP1RP43220 463 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SOX9P48436 509 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 BMXP51813 675 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ACTBP60709 375 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 STXBP1P61764 594 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 ACTG1P63261 375 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 CDK6Q00534 326 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SPHARQ15513 63 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 C9orf50Q5SZB4 431 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ALKAL1Q6UXT8 129 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 CREB3L2Q70SY1 520 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 TMPRSS11BQ86T26 416 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 PAPD5Q8NDF8 572 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 SNAPC3Q92966 411 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 TRIB3Q96RU7 358 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 VRK1Q99986 396 aaPredicted RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 DERL2Q9GZP9 239 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 ABCB8Q9NUT2 735 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 MED31Q9Y3C7 131 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 SCN10AQ9Y5Y9 1956 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 E7ESA3 106 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 STK25O00506 426 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 AQP9O43315 295 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 PRAMEF2O60811 474 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 BCAS1O75363 584 aaPredicted RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 MAOAP21397 527 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 NSG1P42857 185 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SMAD3P84022 425 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 KIAA1161Q6NSJ0 714 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SLC15A3Q8IY34 581 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 OR1J4Q8NGS1 313 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ADAMTS19Q8TE59 1207 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 MOAP1Q96BY2 351 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 BORCS6Q96GS4 357 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 OR2M2Q96R28 347 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 IL4I1Q96RQ9 567 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 DPYSL5Q9BPU6 564 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 RAB11FIP5Q9BXF6 653 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 AMBNQ9NP70 447 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 C14orf119Q9NWQ9 140 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 A0A0G2JMP0 313 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 LINC01553A4QN01 128 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 RHPN2P1A8MT19 583 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 GRXCR1A8MXD5 290 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ATP6V1G2-DDX39BF2Z307 99 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 H7C417 338 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SCN2BO60939 215 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 CRTAPO75718 401 aaPredicted RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 EBLN1P0CF75 366 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 DSC1Q08554 894 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 RHBDF2Q6PJF5 856 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 C3P1Q6ZMU1 363 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ZC3HC1Q86WB0 502 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 OR4M2Q8NGB6 313 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 OR6Q1Q8NGQ2 317 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 FBXL21Q9UKT6 434 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 EEF1E1O43324 174 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 PI15O43692 258 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 BUD23O43709 281 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 PEX14O75381 377 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 C8AP07357 584 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 CLUP10909 449 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ASPAP45381 313 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 GALNT1Q10472 559 aaPredicted RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 GPR17Q13304 367 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 PROX2Q3B8N5 592 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 DESI1Q6ICB0 168 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 FAM151BQ6UXP7 276 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 LACC1Q8IV20 430 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 LINC01599Q8WXQ3 324 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SGTBQ96EQ0 304 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
UFD1-205ENST00000459854 BPIFA1Q9NP55 256 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 FANCFQ9NPI8 374 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 ASF1AQ9Y294 204 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
UFD1-205ENST00000459854 CLCA3PQ9Y6N3 262 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms