RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ZYG11AQ6WRX3 759 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 C4orf33Q8N1A6 199 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 ZCCHC7Q8N3Z6 543 aaKnown RBP19.42■□□□□ 0.7
VARS-218ENST00000459667 L3HYPDHQ96EM0 354 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 ZNF717Q9BY31 904 aaPredicted RBP19.42■□□□□ 0.7
VARS-218ENST00000459667 PNO1Q9NRX1 252 aaKnown RBP19.42■□□□□ 0.7
VARS-218ENST00000459667 PLA2G3Q9NZ20 509 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 LGALS13Q9UHV8 139 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 BAHCC1Q9P281 2608 aa19.42■□□□□ 0.7
VARS-218ENST00000459667 SPENQ96T58 3664 aaKnown RBP19.42■□□□□ 0.7
VARS-218ENST00000459667 CNTRLQ7Z7A1 2325 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 BLACEA4D250 179 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 SYNDIG1LA6NDD5 238 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 G3V2L1 256 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 PLIN3O60664 434 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 CTNSO60931 367 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 MYO1DO94832 1006 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 OR4F21O95013 312 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 MYL2P10916 166 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 BSGP35613 385 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 TAS2R50P59544 299 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 ZNF169Q14929 603 aaPredicted RBP19.41■□□□□ 0.7
VARS-218ENST00000459667 TLR1Q15399 786 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 SGO1Q5FBB7 561 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 FCRLBQ6BAA4 426 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 H3F3CQ6NXT2 135 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 NUDT13Q86X67 352 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 MYRIPQ8NFW9 859 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 ELP5Q8TE02 316 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 CCDC126Q96EE4 140 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 ZNF354BQ96LW1 612 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 ZNF382Q96SR6 550 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 TMEM109Q9BVC6 243 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 IQCGQ9H095 443 aaKnown RBP19.41■□□□□ 0.7
VARS-218ENST00000459667 MS4A12Q9NXJ0 267 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 MAP10Q9P2G4 905 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 PHF11Q9UIL8 331 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 ZNF225Q9UK10 706 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 SNX6Q9UNH7 406 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 PCDHGA10Q9Y5H3 936 aa19.41■□□□□ 0.7
VARS-218ENST00000459667 EEDO75530 441 aaKnown RBP19.4■□□□□ 0.7
VARS-218ENST00000459667 SEMA3DO95025 777 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 MLYCDO95822 493 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 WDPCPO95876 746 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 F10P00742 488 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 PPP2R1BP30154 601 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 STX4Q12846 297 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 TERF2Q15554 542 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 ACER2Q5QJU3 275 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 GPRIN3Q6ZVF9 776 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 GPR180Q86V85 440 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 CRLF3Q8IUI8 442 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 KIF2BQ8N4N8 673 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 SLC5A8Q8N695 610 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 CCDC63Q8NA47 563 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 CATSPER1Q8NEC5 780 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 NFAM1Q8NET5 270 aaPredicted RBP19.4■□□□□ 0.7
VARS-218ENST00000459667 SELENOMQ8WWX9 145 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 HAS2Q92819 552 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 RNF32Q9H0A6 362 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 DDX31Q9H8H2 851 aaKnown RBP19.4■□□□□ 0.7
VARS-218ENST00000459667 ADAP2Q9NPF8 381 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 LYARQ9NX58 379 aaKnown RBP19.4■□□□□ 0.7
VARS-218ENST00000459667 STMN3Q9NZ72 180 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 MID2Q9UJV3 735 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 STK38LQ9Y2H1 464 aa19.4■□□□□ 0.7
VARS-218ENST00000459667 A0A0A6YYD5 115 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 LDB3O75112 727 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 PDYNP01213 254 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 IFNA16P05015 189 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 HNRNPH2P55795 449 aaKnown RBP19.39■□□□□ 0.69
VARS-218ENST00000459667 TNFRSF17Q02223 184 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 KCNC4Q03721 635 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 SLC18A2Q05940 514 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 LCP2Q13094 533 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 MEP1AQ16819 746 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 KRT71Q3SY84 523 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 FAM219BQ5XKK7 198 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 CYP20A1Q6UW02 462 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 CROCCP2Q86T23 111 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 ATCAYQ86WG3 371 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 BEST3Q8N1M1 668 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 CISD2Q8N5K1 135 aaKnown RBP19.39■□□□□ 0.69
VARS-218ENST00000459667 CCNYL1Q8N7R7 359 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 CDYL2Q8N8U2 506 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 RDH11Q8TC12 318 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 SNRNP40Q96DI7 357 aaKnown RBP19.39■□□□□ 0.69
VARS-218ENST00000459667 ALOXE3Q9BYJ1 711 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 C12orf65Q9H3J6 166 aaKnown RBP19.39■□□□□ 0.69
VARS-218ENST00000459667 FARSBQ9NSD9 589 aaKnown RBP19.39■□□□□ 0.69
VARS-218ENST00000459667 ABI3Q9P2A4 366 aa19.39■□□□□ 0.69
VARS-218ENST00000459667 MYOCOSA0A1B0GUC4 107 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 OR5H15A6NDH6 313 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 TMPRSS11DO60235 418 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 TLX1P31314 330 aaPredicted RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 BUD31P41223 144 aaPredicted RBP19.38■□□□□ 0.69
VARS-218ENST00000459667 TNFSF10P50591 281 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 NAA20P61599 178 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 SERTAD2Q14140 314 aa19.38■□□□□ 0.69
VARS-218ENST00000459667 ELAVL1Q15717 326 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms