RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 USP22Q9UPT9 525 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 MRPS2Q9Y399 296 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 TCRBV3S1A0A5B6 114 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 SIGLEC6O43699 453 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 GPX2P18283 190 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 CD1CP29017 333 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 SNRPNP63162 240 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 MRPS22P82650 360 aaKnown RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 RHDQ02161 417 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PRTGQ2VWP7 1150 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 CYP2R1Q6VVX0 501 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 Q8N9G6 341 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ZFP90Q8TF47 636 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 OR5P2Q8WZ92 322 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ZNF285Q96NJ3 590 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 PIF1Q9H611 641 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ACSS1Q9NUB1 689 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-204ENST00000459639 C5AR2Q9P296 337 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 UTS2RQ9UKP6 389 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 ANGPTL2Q9UKU9 493 aa23.13■■□□□ 1.29
U2AF1-204ENST00000459639 LY6G6EA0A0G2JKS1 128 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 ABCB1P08183 1280 aaPredicted RBP23.12■■□□□ 1.29
U2AF1-204ENST00000459639 CSF2RBP32927 897 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 GZMMP51124 257 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 MLC1Q15049 377 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 LPAL2Q16609 132 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 AMZ1Q400G9 498 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 WDR74Q6RFH5 385 aaPredicted RBP23.12■■□□□ 1.29
U2AF1-204ENST00000459639 SERPINA11Q86U17 422 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 ARHGEF39Q8N4T4 335 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 GOLM1Q8NBJ4 401 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 ZBED6CLQ96FA7 236 aaPredicted RBP23.12■■□□□ 1.29
U2AF1-204ENST00000459639 LYRM4Q9HD34 91 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 NEUROD4Q9HD90 331 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 SLAMF7Q9NQ25 335 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 SEMA5BQ9P283 1151 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 U3KQA8 63 aa23.12■■□□□ 1.29
U2AF1-204ENST00000459639 PCDHGA12O60330 932 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 NR2F6P10588 404 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 ANPEPP15144 967 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 IL1RNP18510 177 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 GGT1P19440 569 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 BUD31P41223 144 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-204ENST00000459639 TNFRSF17Q02223 184 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 CFHR1Q03591 330 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 SLC34A1Q06495 639 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 SLC14A1Q13336 389 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 C18orf63Q68DL7 685 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 SLC48A1Q6P1K1 146 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 KLHL6Q8WZ60 621 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 DUS3LQ96G46 650 aaKnown RBP23.11■■□□□ 1.29
U2AF1-204ENST00000459639 SLC35C2Q9NQQ7 365 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 PRDM9Q9NQV7 894 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 DNAAF2Q9NVR5 837 aaKnown RBP23.11■■□□□ 1.29
U2AF1-204ENST00000459639 MS4A12Q9NXJ0 267 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 DAPP1Q9UN19 280 aa23.11■■□□□ 1.29
U2AF1-204ENST00000459639 ELOVL7A1L3X0 281 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 H3BNX3 289 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 GALR3O60755 368 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-204ENST00000459639 MPLP40238 635 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 PRSS42Q7Z5A4 293 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 MICU2Q8IYU8 434 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 UCN3Q969E3 161 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 REXO5Q96IC2 774 aaKnown RBP23.1■■□□□ 1.29
U2AF1-204ENST00000459639 SPATA9Q9BWV2 254 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 TRIM4Q9C037 500 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 KCMF1Q9P0J7 381 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 STOML1Q9UBI4 398 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 KLHL3Q9UH77 587 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 GMEB2Q9UKD1 530 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 CES1P1Q9UKY3 287 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 PCDHGA5Q9Y5G8 931 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 DNAH14Q0VDD8 3507 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 MUC3AQ02505 3323 aa23.1■■□□□ 1.29
U2AF1-204ENST00000459639 PRKRAO75569 313 aaKnown RBP23.09■■□□□ 1.29
U2AF1-204ENST00000459639 CPN2P22792 545 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NTSP30990 170 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 MANFP55145 182 aaKnown RBP23.09■■□□□ 1.29
U2AF1-204ENST00000459639 LIM2P55344 173 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 SQSTM1Q13501 440 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 RUNX2Q13950 521 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 TCTE1Q5JU00 501 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 GUSBP11Q6P575 273 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 C10orf111Q8N326 155 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 DTWD1Q8N5C7 304 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 EID2Q8N6I1 236 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 OR2I1PQ8NGU4 316 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 ZFP28Q8NHY6 868 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 SLC35A5Q9BS91 424 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NPLQ9BXD5 320 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-204ENST00000459639 STARD5Q9NSY2 213 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 RP1P56715 2156 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 EME2A4GXA9 379 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NCK1P16333 377 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 MAP7Q14244 749 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NDUFA9Q16795 377 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 GLYATQ6IB77 296 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 NIPAL1Q6NVV3 410 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 FAM180BQ6P0A1 224 aa23.09■■□□□ 1.29
U2AF1-204ENST00000459639 KMT5CQ86Y97 462 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms