RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 HSPA12AO43301 675 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PI15O43692 258 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SH3BGRLO75368 114 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 KAT7O95251 611 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 RAF1P04049 648 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 LGALS2P05162 132 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 HLA-DQB2P05538 268 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 UCHL1P09936 223 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TPT1P13693 172 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 EDNRAP25101 427 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MTNR1AP48039 350 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 C1QTNF8P60827 252 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TUSC3Q13454 348 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NAE1Q13564 534 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 LY6KQ17RY6 165 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TCEAL5Q5H9L2 206 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 C1orf220Q5T0J3 134 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DPY19L2P1Q6NXN4 242 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CATSPERGQ6ZRH7 1159 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 GDPD3Q7L5L3 318 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TRIM46Q7Z4K8 759 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CLEC14AQ86T13 490 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TAC4Q86UU9 113 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ATCAYQ86WG3 371 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DNAJC22Q8N4W6 341 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 Q8N9G6 341 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NFKBIDQ8NI38 313 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CD300LFQ8TDQ1 290 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ASB13Q8WXK3 278 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FATE1Q969F0 183 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SECISBP2Q96T21 854 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ADAM2Q99965 735 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 KXD1Q9BQD3 176 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TTPALQ9BTX7 342 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PIM2Q9P1W9 311 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TRAPPC4Q9Y296 219 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SPO11Q9Y5K1 396 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ENPP4Q9Y6X5 453 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 IQCMA0A1B0GVH7 501 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ANKRD28O15084 1053 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OIP5O43482 229 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 B4GAT1O43505 415 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DIRAS1O95057 198 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ALDOBP05062 364 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 UQCRC2P22695 453 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 EPHB3P54753 998 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NKX6-1P78426 367 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF169Q14929 603 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PEA15Q15121 130 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 LIPJQ5W064 366 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FAM205BPQ63HN1 556 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ELP2Q6IA86 826 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FAM171BQ6P995 826 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 GSG1LQ6UXU4 331 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 WASH2PQ6VEQ5 465 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CEACAM19Q7Z692 300 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TMPRSS11BQ86T26 416 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 EID2Q8N6I1 236 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 KIAA1958Q8N8K9 716 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ANKLE1Q8NAG6 615 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OR1M1Q8NGA1 313 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CERKQ8TCT0 537 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TRAPPC12Q8WVT3 735 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 HBEGFQ99075 208 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PKP4Q99569 1192 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TREX2Q9BQ50 279 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 MCMBPQ9BTE3 642 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 EBPLQ9BY08 206 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 XYLT2Q9H1B5 865 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 DEFB129Q9H1M3 183 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SYT4Q9H2B2 425 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OR51V1Q9H2C8 321 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OR51I1Q9H343 314 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PIGMQ9H3S5 423 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PDZD7Q9H5P4 517 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 METTL8Q9H825 291 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CARS2Q9HA77 564 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 INIPQ9NRY2 104 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 PLCXD1Q9NUJ7 323 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CYB5R1Q9UHQ9 305 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 GXYLT2A0PJZ3 443 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 OR6C75A6NL08 312 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 HAS3O00219 553 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CTDSP2O14595 271 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 XKRYO14609 159 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SLC16A5O15375 505 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ARPC5O15511 151 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 FABP7O15540 132 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SDC3O75056 442 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ERAL1O75616 437 aaKnown RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 ENDOD1O94919 500 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SCG5P05408 212 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 CSF1P09603 554 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 NFYAP23511 347 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-203ENST00000456367 TGM4P49221 684 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SCAPQ12770 1279 aa4.81□□□□□ -1.64
PCDH9-203ENST00000456367 SOWAHAQ2M3V2 549 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms