RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 THAP3Q8WTV1 239 aaPredicted RBP12.09□□□□□ -0.47
TREX1-203ENST00000456089 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
TREX1-203ENST00000456089 ISL2Q96A47 359 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 PHF21BQ96EK2 531 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 SCMH1Q96GD3 660 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 FRMD6Q96NE9 622 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 KCNC2Q96PR1 638 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
TREX1-203ENST00000456089 LRFN1Q9P244 771 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 ZNF490Q9ULM2 529 aaPredicted RBP12.09□□□□□ -0.47
TREX1-203ENST00000456089 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
TREX1-203ENST00000456089 ASB1Q9Y576 335 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 PDZD2O15018 2839 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 CSMD2Q7Z408 3487 aa12.09□□□□□ -0.47
TREX1-203ENST00000456089 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 ENO4A6NNW6 628 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 SP1P08047 785 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 CD46P15529 392 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 EPORP19235 508 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 HTR1EP28566 365 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 PPP2R1BP30154 601 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 RFC3P40938 356 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 MAGEA12P43365 314 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 CCNG1P51959 295 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 RAP1GDS1P52306 607 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 TAS2R50P59544 299 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 RBPJQ06330 500 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 PCBP2Q15366 365 aaKnown RBP eCLIP12.08□□□□□ -0.48
TREX1-203ENST00000456089 AP5B1Q2VPB7 878 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 LIPJQ5W064 366 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 GRHL2Q6ISB3 625 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 QSOX2Q6ZRP7 698 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 ZNF227Q86WZ6 799 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 GSPT2Q8IYD1 628 aaKnown RBP12.08□□□□□ -0.48
TREX1-203ENST00000456089 CA13Q8N1Q1 262 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
TREX1-203ENST00000456089 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 MAGED4Q96JG8 741 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 GPR137Q96N19 417 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 GPR78Q96P69 363 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 F2RL3Q96RI0 385 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 MRPL46Q9H2W6 279 aaKnown RBP12.08□□□□□ -0.48
TREX1-203ENST00000456089 IPPKQ9H8X2 491 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 L2HGDHQ9H9P8 463 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 PRDM9Q9NQV7 894 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 ZNF358Q9NW07 568 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 PSMC3IPQ9P2W1 217 aaPredicted RBP12.08□□□□□ -0.48
TREX1-203ENST00000456089 XPR1Q9UBH6 696 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 PCDHGA11Q9Y5H2 935 aa12.08□□□□□ -0.48
TREX1-203ENST00000456089 ASPDHA6ND91 283 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SAGE2PA6NJ88 616 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TGFBR3LH3BV60 316 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 KLK8O60259 260 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 UGDHO60701 494 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 PRAMEF4O60810 478 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SH3BGRLO75368 114 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SLC25A12O75746 678 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 CLDN9O95484 217 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TGFB1P01137 390 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 ESRRAP11474 423 aaPredicted RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 CD22P20273 847 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TAC1P20366 129 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 HNRNPFP52597 415 aaKnown RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 RAB38P57729 211 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 ART3Q13508 389 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 RUNX2Q13950 521 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 PRAMEF9Q5VWM5 478 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TTC19Q6DKK2 380 aaPredicted RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 ADNP2Q6IQ32 1131 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SLC25A25Q6KCM7 469 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 ABHD17CQ6PCB6 329 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 GOLGA7Q7Z5G4 137 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 LAS2Q8IYD9 372 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 TMEM178AQ8NBL3 297 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 LRRN4CLQ8ND94 238 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TMEM52Q8NDY8 209 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 NFAM1Q8NET5 270 aaPredicted RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 OR7G3Q8NG95 312 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 TBCDQ9BTW9 1192 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 PRTFDC1Q9NRG1 225 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 PNO1Q9NRX1 252 aaKnown RBP12.07□□□□□ -0.48
TREX1-203ENST00000456089 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 MMACHCQ9Y4U1 282 aa12.07□□□□□ -0.48
TREX1-203ENST00000456089 ZNF407Q9C0G0 2248 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 IGKV3D-11A0A0A0MRZ8 115 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 TCRBV16S1A1N1A0A5B0 115 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 STX16-NPEPL1H3BU86 382 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 STX16O14662 325 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 MYO1DO94832 1006 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms