RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TM9SF1O15321 606 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SHOX2O60902 331 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 BCAS2O75934 225 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZWINTO95229 277 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 WISP3O95389 354 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TOP3BO95985 862 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 GSTA1P08263 222 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SLC35E2BP0CK96 405 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 PKMP14618 531 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RPS2P15880 293 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZNF7P17097 686 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CD9P21926 228 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TCEA1P23193 301 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RPS3P23396 243 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ACRV1P26436 265 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 POU1F1P28069 291 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SLC26A3P40879 764 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SKIV2L2P42285 1042 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 MTNR1AP48039 350 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 LUMP51884 338 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 FOXL2P58012 376 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SLC26A5P58743 744 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 STARD6P59095 220 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 HTD2P86397 168 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZBTB16Q05516 673 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 DLG1Q12959 904 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPRL3Q12980 569 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ITIH4Q14624 930 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 IL13RA2Q14627 380 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ST3GAL2Q16842 350 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 AP5B1Q2VPB7 878 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 AASDHQ4L235 1098 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 FBLN7Q53RD9 439 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 HENMT1Q5T8I9 393 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 HHATQ5VTY9 493 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TTC19Q6DKK2 380 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ETFRF1Q6IPR1 90 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 FAM45BPQ6NSW5 357 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TMEM207Q6UWW9 146 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 C16orf89Q6UX73 402 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 KYAT3Q6YP21 454 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 GLDNQ6ZMI3 551 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RBPMS2Q6ZRY4 209 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CDHR3Q6ZTQ4 885 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 USP30Q70CQ3 517 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 IQCHQ86VS3 1027 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 DTX1Q86Y01 620 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CENPLQ8N0S6 344 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RBFAQ8N0V3 343 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TRAM1L1Q8N609 369 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CLDN19Q8N6F1 224 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 KYQ8NBH2 561 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 FAM45AQ8TCE6 357 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 GANCQ8TET4 914 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZCCHC14Q8WYQ9 949 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ULK4Q96C45 1275 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 AP2M1Q96CW1 435 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 DTD2Q96FN9 168 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 VPS50Q96JG6 964 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 GPR78Q96P69 363 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 NDNQ99608 321 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPAS1Q99742 590 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 OLFM1Q99784 485 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZSCAN5AQ9BUG6 496 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 DPCDQ9BVM2 203 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RIOK2Q9BVS4 552 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SPATA16Q9BXB7 569 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 C1QTNF1Q9BXJ1 281 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CAPS2Q9BXY5 557 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 REXO4Q9GZR2 422 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 PCED1AQ9H1Q7 454 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 P2RY12Q9H244 342 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 ZNF552Q9H707 407 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 MLXIPLQ9NP71 852 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 PCMTD2Q9NV79 361 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 TAS2R3Q9NYW6 316 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 NCKIPSDQ9NZQ3 722 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SLC17A7Q9P2U7 560 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SERGEFQ9UGK8 458 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CD84Q9UIB8 345 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CRLS1Q9UJA2 301 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SERTAD3Q9UJW9 196 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 EMCNQ9ULC0 261 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CNOT6Q9ULM6 557 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 SCML1Q9UN30 329 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 RUVBL2Q9Y230 463 aaKnown RBP4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 KCNK7Q9Y2U2 307 aa4.98□□□□□ -1.61
HMGB1P4-201ENST00000455362 CABIN1Q9Y6J0 2220 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 VCANP13611 3396 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 TECTAO75443 2155 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 A0A087X1B8 175 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 KANSL1LA0AUZ9 987 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPIPB13A6NJU9 1138 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPIPB5A8MRT5 1133 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 NPIPB4C9JG80 1138 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 H3BMM5 538 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 K7EPI3 171 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 QSOX1O00391 747 aa4.97□□□□□ -1.61
HMGB1P4-201ENST00000455362 HOXA3O43365 443 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms