RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 K7ESM1 405 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 PLPP1O14494 284 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 AIREO43918 545 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 SLITRK5O94991 958 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 OPN1SWP03999 348 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 IFNW1P05000 195 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 RPLP0P05388 317 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 GPR89BP0CG08 455 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ADORA3P0DMS8 318 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ACRP10323 421 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 BSGP35613 385 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 EIF2DP41214 584 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 CRISP1P54107 249 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 IFITM3Q01628 133 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 SFSWAPQ12872 951 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 DGCR6Q14129 220 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF404Q494X3 552 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 FRMPD2BQ6IN97 320 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 BTLAQ7Z6A9 289 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 C17orf64Q86WR6 236 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 C12orf40Q86WS4 652 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ZBTB8BQ8NAP8 495 aaPredicted RBP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF675Q8TD23 568 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 RASSF5Q8WWW0 418 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ITFG2Q969R8 447 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 TM4SF18Q96CE8 201 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 AIF1LQ9BQI0 150 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 FUZQ9BT04 418 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 MENTQ9BUN1 341 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 C11orf49Q9H6J7 331 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 SP140LQ9H930 580 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 ZSCAN32Q9NX65 697 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 DPP7Q9UHL4 492 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 MKLN1Q9UL63 735 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 MGAT4BQ9UQ53 548 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 FAM32AQ9Y421 112 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 COL4A3Q01955 1670 aa11.93□□□□□ -0.5
ECHDC1-209ENST00000454591 MN1Q10571 1320 aaPredicted RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 KRBA1A5PL33 1030 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 PRRT4C9JH25 899 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 C5orf67F2Z3F1 127 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 CAPN5O15484 640 aaPredicted RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 MMP20O60882 483 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 MFN2O95140 757 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 NFATC1O95644 943 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 C21orf33P30042 268 aaPredicted RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ETV6P41212 452 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 PSMD7P51665 324 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ARFIP1P53367 373 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 METAP1P53582 386 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 NTHL1P78549 312 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 PRKCDQ05655 676 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ILKQ13418 452 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 COLEC12Q5KU26 742 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 MEDAGQ5VYS4 303 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 KLHL17Q6TDP4 642 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 FAM83HQ6ZRV2 1179 aaPredicted RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 TRMT11Q7Z4G4 463 aaKnown RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 TRIM74Q86UV6 250 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ADGRF3Q8IZF5 1079 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 AMER2Q8N7J2 671 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 GALNT6Q8NCL4 622 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF740Q8NDX6 193 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 OR5K2Q8NHB8 316 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 RPL3LQ92901 407 aaKnown RBP11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 NXPE3Q969Y0 559 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 MIEF1Q9NQG6 463 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
ECHDC1-209ENST00000454591 BOLA2-SMG1P6H3BVE0 249 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 PCDH17O14917 1159 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 PDPK1O15530 556 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 LZTS3O60299 673 aaPredicted RBP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 SH3BGRLO75368 114 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 EPCAMP16422 314 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 TNFRSF1BP20333 461 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 ENDOUP21128 410 aaKnown RBP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 GADD45AP24522 165 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 OR1E2P47887 323 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 KCNJ5P48544 419 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 CLK1P49759 484 aaKnown RBP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 SMIM11AP58511 58 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF45Q02386 682 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 DMPKQ09013 629 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 NFE2L1Q14494 772 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 PTGES3Q15185 160 aaKnown RBP11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 ZNF181Q2M3W8 571 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 TIMM50Q3ZCQ8 353 aa11.91□□□□□ -0.5
ECHDC1-209ENST00000454591 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms