RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 LCN10Q6JVE6 187 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 ABHD13Q7L211 337 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
SCN9A-205ENST00000454569 ZCCHC7Q8N3Z6 543 aaKnown RBP10.38□□□□□ -0.75
SCN9A-205ENST00000454569 SERINC2Q96SA4 455 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 NPAS2Q99743 824 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 SLC22A11Q9NSA0 550 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 SLAMF8Q9P0V8 285 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 SERTAD3Q9UJW9 196 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 AKAP13Q12802 2813 aa10.38□□□□□ -0.75
SCN9A-205ENST00000454569 SPTBN4Q9H254 2564 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 TEX51A0A1B0GUA7 166 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 FAM234BA2RU67 622 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SCAMP2O15127 329 aaKnown RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 CHST10O43529 356 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SCN2BO60939 215 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 JRKO75564 520 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 ATP5HO75947 161 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 AIFM1O95831 613 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 CSRP1P21291 193 aaKnown RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 ALAS2P22557 587 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 PTGER1P34995 402 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 ARFIP1P53367 373 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 MC2RQ01718 297 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 ACY1Q03154 408 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 KLC1Q07866 573 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 GRM7Q14831 915 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SLC9A5Q14940 896 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 KRT72Q14CN4 511 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 PGS1Q32NB8 556 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 FAM174BQ3ZCQ3 159 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 TIGD2Q4W5G0 525 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 NDUFAF5Q5TEU4 345 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 OR4F3Q6IEY1 312 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SLC2A7Q6PXP3 512 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 RINLQ6ZS11 566 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 PAGE2Q7Z2X7 111 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 GPR180Q86V85 440 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 TICAM1Q8IUC6 712 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 FAM47BQ8NA70 645 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 AGBL5Q8NDL9 886 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SRFBP1Q8NEF9 429 aaKnown RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 CIDECQ96AQ7 238 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SLC7A6OSQ96CW6 309 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 RCN3Q96D15 328 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 MMABQ96EY8 250 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 CENPKQ9BS16 269 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 RBCK1Q9BYM8 510 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 NLNQ9BYT8 704 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 COPS7BQ9H9Q2 264 aaPredicted RBP10.37□□□□□ -0.75
SCN9A-205ENST00000454569 ANKHQ9HCJ1 492 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SLAMF7Q9NQ25 335 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 SLC6A13Q9NSD5 602 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 CES1P1Q9UKY3 287 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 DAPP1Q9UN19 280 aa10.37□□□□□ -0.75
SCN9A-205ENST00000454569 URADA6NGE7 173 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 CYR61O00622 381 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TXNDC9O14530 226 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 SLC30A4O14863 429 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 B3GALT2O43825 422 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 UNC5CO95185 931 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 NSA2O95478 260 aaKnown RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 SNRPB2P08579 225 aaKnown RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 FGF5P12034 268 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 ADSLP30566 484 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TSFMP43897 325 aaKnown RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 ALDH9A1P49189 494 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 NOVA1P51513 510 aaKnown RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 C21orf58P58505 322 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 SHC2P98077 582 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 PDE7AQ13946 482 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 CYLC2Q14093 348 aaPredicted RBP10.36□□□□□ -0.75
SCN9A-205ENST00000454569 FAM53BQ14153 422 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 RCAN2Q14206 197 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 HERC3Q15034 1050 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 ANKRD46Q86W74 232 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 OR4N5Q8IXE1 308 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 GPR135Q8IZ08 494 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 CLECL1Q8IZS7 167 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TMEM132CQ8N3T6 1108 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 AMER2Q8N7J2 671 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 MIEF2Q96C03 454 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 COQ8BQ96D53 544 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 SPDL1Q96EA4 605 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 PEX11GQ96HA9 241 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 INPP5KQ9BT40 448 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TRIM8Q9BZR9 551 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 REEP4Q9H6H4 257 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 DLL3Q9NYJ7 618 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 NDOR1Q9UHB4 597 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 ATP6V1HQ9UI12 483 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 TAGLN3Q9UI15 199 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 RARRES3Q9UL19 164 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 LOXL2Q9Y4K0 774 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 NEUROG3Q9Y4Z2 214 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 PCDHA9Q9Y5H5 950 aa10.36□□□□□ -0.75
SCN9A-205ENST00000454569 B3GALT1Q9Y5Z6 326 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms