RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 OR7A17O14581 309 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 FGF17O60258 216 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 SMIM24O75264 130 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 ITGA10O75578 1167 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 SLC25A12O75746 678 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 NEURL1O76050 574 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 WISP2O76076 250 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CLDN1O95832 211 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CRYABP02511 175 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 GBAP04062 536 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 SP1P08047 785 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 FAM153BP0C7A2 387 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 MYBL2P10244 700 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TSPAN8P19075 237 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TNNI3P19429 210 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 HIST1H1TP22492 207 aaPredicted RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 CASP2P42575 452 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 NEK2P51955 445 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 GPR85P60893 370 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 ALDH6A1Q02252 535 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 SLAMF1Q13291 335 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 RCN2Q14257 317 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 FAM153CQ494X1 144 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 LIPJQ5W064 366 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 C18orf63Q68DL7 685 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TTC19Q6DKK2 380 aaPredicted RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 OR4C11Q6IEV9 310 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CHSY3Q70JA7 882 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CCDC91Q7Z6B0 441 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 RELL1Q8IUW5 271 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 IFT20Q8IY31 132 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CYP4Z2PQ8N1L4 340 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TMEM156Q8N614 296 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CPSF7Q8N684 471 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 ZNF321PQ8N8H1 164 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TMEM178AQ8NBL3 297 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 FAM98AQ8NCA5 519 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 SRFBP1Q8NEF9 429 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 OR52B6Q8NGF0 335 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TMEM125Q96AQ2 219 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 RGMAQ96B86 450 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 VMP1Q96GC9 406 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CENPKQ9BS16 269 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TBCDQ9BTW9 1192 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 ALOXE3Q9BYJ1 711 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 OR8D2Q9GZM6 311 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 ROGDIQ9GZN7 287 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CLK4Q9HAZ1 481 aaKnown RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 SEMA4BQ9NPR2 832 aaPredicted RBP9.03□□□□□ -0.96
USP54-207ENST00000451492 SEC14L3Q9UDX4 400 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 TBK1Q9UHD2 729 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CLDN16Q9Y5I7 305 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 CLCA3PQ9Y6N3 262 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 ICE1Q9Y2F5 2266 aa9.03□□□□□ -0.96
USP54-207ENST00000451492 LRRK2Q5S007 2527 aa9.02□□□□□ -0.96
USP54-207ENST00000451492 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 GLOD5A6NK44 160 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 C17orf105B2RV13 164 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 NPIPA5E9PKD4 350 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 GOLGA8RI6L899 631 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 WWP2O00308 870 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 RIPK2O43353 540 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 KLK8O60259 260 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 ZG16O60844 167 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 EEDO75530 441 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 CLDN9O95484 217 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 ETHE1O95571 254 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 DDAH2O95865 285 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 TUBB4AP04350 444 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 RBP1P09455 135 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 GCAP28676 217 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 SERPINB1P30740 379 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 MAGEA12P43365 314 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 CYB561P49447 251 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 SSR4P51571 173 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 HNRNPH2P55795 449 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 MLF1P58340 268 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 HSF1Q00613 529 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 E2F2Q14209 437 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 PCBP2Q15366 365 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP54-207ENST00000451492 ZRSR2Q15696 482 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 ELAVL1Q15717 326 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 TSNAXIP1Q2TAA8 658 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 TMEM35AQ53FP2 167 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 SGO1Q5FBB7 561 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 DEPDC1Q5TB30 811 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 ZNF324BQ6AW86 544 aaPredicted RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 SLC25A25Q6KCM7 469 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 TMEM132CQ8N3T6 1108 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 HORMAD2Q8N7B1 307 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 PPWD1Q96BP3 646 aaKnown RBP9.02□□□□□ -0.97
USP54-207ENST00000451492 REPS1Q96D71 796 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 FRMD6Q96NE9 622 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 DGAT2Q96PD7 388 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 FUT8Q9BYC5 575 aa9.02□□□□□ -0.97
USP54-207ENST00000451492 LYRM4Q9HD34 91 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms