RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 USP27XA6NNY8 438 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 KDM4EB2RXH2 506 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 HRKO00198 91 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TAPBPO15533 448 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 LDB3O75112 727 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ATP6AP2O75787 350 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 NADKO95544 446 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TUBB4AP04350 444 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ENO2P09104 434 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 C1GALT1C1LP0DN25 315 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 CCL3P10147 92 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 CAPN3P20807 821 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 IVDP26440 423 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ADH7P40394 386 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 SLC6A12P48065 614 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 FNTAP49354 379 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 HK2P52789 917 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 LIM2P55344 173 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 DLX5P56178 289 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 RAB38P57729 211 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 GXYLT1Q4G148 440 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 STEAP4Q687X5 459 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ARHGAP11AQ6P4F7 1023 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TMIGD1Q6UXZ0 262 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 DGAT2L6Q6ZPD8 337 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 KIAA0408Q6ZU52 694 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 FRA10AC1Q70Z53 315 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 OR4N5Q8IXE1 308 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 KLHL7Q8IXQ5 586 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 DMRTC2Q8IXT2 367 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 RNF175Q8N4F7 328 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TMEM251Q8N6I4 163 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TRPV3Q8NET8 790 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 OR10Q1Q8NGQ4 319 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 PTPMT1Q8WUK0 201 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 EXT2Q93063 718 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 SCYL1Q96KG9 808 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 RASL10BQ96S79 203 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 SMC6Q96SB8 1091 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 MAPKAP1Q9BPZ7 522 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 CCDC77Q9BR77 488 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ZNF559Q9BR84 538 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 SORBS1Q9BX66 1292 aaKnown RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TRIM31Q9BZY9 425 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 KCNJ16Q9NPI9 418 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TIMMDC1Q9NPL8 285 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 SMYD2Q9NRG4 433 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ALKBH4Q9NXW9 302 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 TUBA8Q9NY65 449 aaPredicted RBP9.41□□□□□ -0.9
LINC01004-202ENST00000450686 Q9UFV3 132 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 FAM215AQ9Y5M1 114 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 KCNE2Q9Y6J6 123 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 ARHGAP21Q5T5U3 1957 aa9.41□□□□□ -0.9
LINC01004-202ENST00000450686 URADA6NGE7 173 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 SAP18O00422 153 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 CYR61O00622 381 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 CLGNO14967 610 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 FANCGO15287 622 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 PHGDHO43175 533 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 B3GALT2O43825 422 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 PRKRAO75569 313 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZFAND5O76080 213 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ETHE1O95571 254 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 TTC4O95801 387 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 GLI4P10075 376 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 CD22P20273 847 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 PIGAP37287 484 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 HSPA7P48741 367 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 IST1P53990 364 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 STXBP1P61764 594 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZNF793Q6ZN11 406 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 UBE3DQ7Z6J8 389 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZC3HC1Q86WB0 502 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZZZ3Q8IYH5 903 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 SNX31Q8N9S9 440 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 GRK7Q8WTQ7 553 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ASB5Q8WWX0 329 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 RHBDF1Q96CC6 855 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ALOXE3Q9BYJ1 711 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZDHHC11Q9H8X9 412 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ADAP2Q9NPF8 381 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 SPRR3Q9UBC9 169 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 MYOTQ9UBF9 498 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 YARS2Q9Y2Z4 477 aaKnown RBP9.4□□□□□ -0.9
LINC01004-202ENST00000450686 JRKLQ9Y4A0 524 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 OARD1Q9Y530 152 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 TEX264Q9Y6I9 313 aa9.4□□□□□ -0.9
LINC01004-202ENST00000450686 MPDZO75970 2070 aa9.4□□□□□ -0.91
LINC01004-202ENST00000450686 C17orf105B2RV13 164 aa9.39□□□□□ -0.91
LINC01004-202ENST00000450686 GLSO94925 669 aaPredicted RBP9.39□□□□□ -0.91
LINC01004-202ENST00000450686 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
LINC01004-202ENST00000450686 RFPL3SP0C7P2 107 aa9.39□□□□□ -0.91
LINC01004-202ENST00000450686 EPORP19235 508 aa9.39□□□□□ -0.91
LINC01004-202ENST00000450686 TNNI3P19429 210 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms