RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 METTL6Q8TCB7 284 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAR1Q8WVX9 515 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZCCHC14Q8WYQ9 949 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 CFHR4Q92496 578 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 RFT1Q96AA3 541 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 BIRC7Q96CA5 298 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 TM4SF18Q96CE8 201 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 CCDC124Q96CT7 223 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 PDLIM5Q96HC4 596 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLITRK1Q96PX8 696 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM111AQ96PZ2 611 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 RBP7Q96R05 134 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 LMF1Q96S06 567 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 AGPAT1Q99943 283 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 MYOCQ99972 504 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 TMED9Q9BVK6 235 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 MND1Q9BWT6 205 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC26A6Q9BXS9 759 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FRMD8P1Q9BZ68 369 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 MRPL37Q9BZE1 423 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 C20orf27Q9GZN8 174 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM49AQ9H0Q0 323 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ABCG8Q9H221 673 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 BOLA2Q9H3K6 86 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM83DQ9H4H8 585 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 OPA3Q9H6K4 179 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 KAT8Q9H7Z6 458 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ABCB10Q9NRK6 738 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 OLA1Q9NTK5 396 aaKnown RBP3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 FAM49BQ9NUQ9 324 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPHK1Q9NYA1 384 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 COQ3Q9NZJ6 369 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF224Q9NZL3 707 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 CFAP97Q9P2B7 532 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPASTQ9UBP0 616 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 MIOXQ9UGB7 285 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAPGEFL1Q9UHV5 662 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 CYTH4Q9UIA0 394 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SH3BGRL2Q9UJC5 107 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ADAMTS5Q9UNA0 930 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 TNFSF13BQ9Y275 285 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLEKHM1Q9Y4G2 1056 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 ALG6Q9Y672 507 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 SESN1Q9Y6P5 492 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 PXDNQ92626 1479 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 PHIPQ8WWQ0 1821 aa3.47□□□□□ -1.85
HMGB3P8-201ENST00000449709 TCRBV7S2A1N4TA0A589 114 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 BCLAF3A2AJT9 711 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RGSL1A5PLK6 1076 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCDC182A6NF36 153 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR6C70A6NIJ9 312 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 B4DXG7 233 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 E9PQ18 207 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM189-UBE2V1I3L0A0 370 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FPGTO14772 594 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DSCR3O14972 297 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 AKR7A2O43488 359 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PROM1O43490 865 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRKYO43930 277 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NOBOXO60393 691 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 HCN1O60741 890 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CREG1O75629 220 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SNAPC5O75971 98 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TOX4O94842 621 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PGLSO95336 258 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 IFNA7P01567 189 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MT-ND3P03897 115 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ALPLP05186 524 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR4E1P0C645 316 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZDHHC11BP0C7U3 371 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRIM49P0CI25 452 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRIM49CP0CI26 452 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 VSIG10L2P0DP72 767 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAP2AP10114 183 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 IFI30P13284 250 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADRB3P13945 408 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 UCHL3P15374 230 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TCF4P15884 667 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PFKLP17858 780 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NELFEP18615 380 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TNNI1P19237 187 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 WARSP23381 471 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PDHA2P29803 388 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC6A4P31645 630 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 LIPAP38571 399 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PMELP40967 661 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RAD52P43351 418 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NT5C2P49902 561 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MEOX1P50221 254 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ERFP50548 548 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DNA2P51530 1060 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NR0B1P51843 470 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 EPHB3P54753 998 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CDH13P55290 713 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 UCP3P55916 312 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 HUNKP57058 714 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CD81P60033 236 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CXCR4P61073 352 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPP30P78346 268 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ASIC1P78348 528 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms