RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CDH11P55287 796 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 CTBP2P56545 445 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GPLD1P80108 840 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 KCNC4Q03721 635 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 XKR7Q5GH72 579 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 COX20Q5RI15 118 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GPRC6AQ5T6X5 926 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF697Q5TEC3 545 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 FRMPD2BQ6IN97 320 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 CAPN13Q6MZZ7 669 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SBSNQ6UWP8 590 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 FAM92BQ6ZTR7 304 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 LINGO2Q7L985 606 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 TOMM5Q8N4H5 51 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 C1orf74Q96LT6 269 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 IL17FQ96PD4 163 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 PRR14Q9BWN1 585 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 RABL2AQ9UBK7 228 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GRIP1Q9Y3R0 1128 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SLC38A8A6NNN8 435 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 MPZL2O60487 215 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GASTP01350 101 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 BPIP17213 487 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 CBLP22681 906 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 DBPQ10586 325 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GPR19Q15760 415 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 RAB41Q5JT25 222 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 Q6ZVU0 165 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 RNF44Q7L0R7 432 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 CMTM8Q8IZV2 173 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 MAP6Q96JE9 813 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SLAMF7Q9NQ25 335 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 FAM120CQ9NX05 1096 aaKnown RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 QPCTLQ9NXS2 382 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 IL17CQ9P0M4 197 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 FBXW2Q9UKT8 454 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 OARD1Q9Y530 152 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 MYADML2A6NDP7 307 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 HHLA1C9JL84 531 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 NEDD8-MDP1E9PL57 170 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GATBO75879 557 aaKnown RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 TP53P04637 393 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ITGAMP11215 1152 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SPTBP11277 2137 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 DNASE1P24855 282 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 GABRR2P28476 465 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 TSPAN5P62079 268 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ODF4Q2M2E3 257 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 KDM4DQ6B0I6 523 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 HUS1BQ8NHY5 278 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 REPS1Q96D71 796 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 YIPF6Q96EC8 236 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
UBE3B-204ENST00000449510 PIP5K1AQ99755 562 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 PPT2Q9UMR5 302 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
UBE3B-204ENST00000449510 PAPPAQ13219 1627 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 APOC3P02656 99 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 HRGP04196 525 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CHMP24386 653 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 RGS8P57771 180 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-204ENST00000449510 VSX2P58304 361 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-204ENST00000449510 LASP1Q14847 261 aaKnown RBP11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ALKAL1Q6UXT8 129 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF852Q6ZMS4 543 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 SLC7A6Q92536 515 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 MAPKAP1Q9BPZ7 522 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 FAM183AA6NL82 134 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 H7C4K7 107 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 J3QLW9 94 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 AOC2O75106 756 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ALX3O95076 343 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ELNP15502 786 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 ZNF19P17023 458 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CXCR2P25025 360 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CXCR4P61073 352 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 SELENOWP63302 87 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 MICAQ29983 383 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 TADA1Q96BN2 335 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 P2RY13Q9BPV8 354 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 RIOK2Q9BVS4 552 aaKnown RBP11.87□□□□□ -0.51
UBE3B-204ENST00000449510 FXYD6Q9H0Q3 95 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 HCN3Q9P1Z3 774 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 F5P12259 2224 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms