RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ATP6V1HQ9UI12 483 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 MAU2Q9Y6X3 613 aa18.46■□□□□ 0.55
SGCE-207ENST00000447873 SEC16AO15027 2179 aa18.46■□□□□ 0.54
SGCE-207ENST00000447873 SCN2AQ99250 2005 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 A0A1W2PP18 115 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 C1orf226A1L170 272 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 ANGPT2O15123 496 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 NTRK1P04629 796 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 PGRP06401 933 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 NR2F6P10588 404 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 PIM1P11309 404 aaPredicted RBP18.45■□□□□ 0.54
SGCE-207ENST00000447873 DDX5P17844 614 aaKnown RBP18.45■□□□□ 0.54
SGCE-207ENST00000447873 CAPN3P20807 821 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 CALB2P22676 271 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 S100A3P33764 101 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 KIR3DL1P43629 444 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 OR1D4P47884 311 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 MAPK10P53779 464 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 RAB15P59190 212 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 SHC2P98077 582 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 TNFRSF17Q02223 184 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 PDE7AQ13946 482 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 MMEL1Q495T6 779 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 DCAF12Q5T6F0 453 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 CEACAM20Q6UY09 585 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 TICAM1Q8IUC6 712 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 DSELQ8IZU8 1212 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 COL26A1Q96A83 441 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 RNF31Q96EP0 1072 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 NDUFAF1Q9Y375 327 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 PCDHA9Q9Y5H5 950 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 KNTC1P50748 2209 aa18.45■□□□□ 0.54
SGCE-207ENST00000447873 GLOD5A6NK44 160 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 CFLARO15519 480 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 PRKRAO75569 313 aaKnown RBP18.44■□□□□ 0.54
SGCE-207ENST00000447873 KCNK5O95279 499 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 LAMP1P11279 417 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 RAB38P57729 211 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 MAT1AQ00266 395 aaKnown RBP18.44■□□□□ 0.54
SGCE-207ENST00000447873 ACTN3Q08043 901 aaPredicted RBP18.44■□□□□ 0.54
SGCE-207ENST00000447873 BNIP1Q12981 228 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 TMPRSS12Q86WS5 348 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 OR8J2Q8NGG1 315 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 WDR36Q8NI36 951 aaKnown RBP18.44■□□□□ 0.54
SGCE-207ENST00000447873 OR52E6Q96RD3 313 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 CSF3RQ99062 836 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 ZNF304Q9HCX3 659 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 EHD3Q9NZN3 535 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 PISDQ9UG56 409 aa18.44■□□□□ 0.54
SGCE-207ENST00000447873 TMEM184BQ9Y519 407 aaPredicted RBP18.44■□□□□ 0.54
SGCE-207ENST00000447873 ERICH4A6NGS2 130 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 PLD2O14939 933 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 PGRMC2O15173 223 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 CPNE3O75131 537 aaKnown RBP18.43■□□□□ 0.54
SGCE-207ENST00000447873 T-ENOLP0DO92 83 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 RNH1P13489 461 aaKnown RBP18.43■□□□□ 0.54
SGCE-207ENST00000447873 ETV5P41161 510 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 CPA2P48052 419 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 MNAT1P51948 309 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 ABHD18Q0P651 414 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 TARDBPQ13148 414 aaKnown RBP eCLIP18.43■□□□□ 0.54
SGCE-207ENST00000447873 DSG2Q14126 1118 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 RSPO4Q2I0M5 234 aaPredicted RBP18.43■□□□□ 0.54
SGCE-207ENST00000447873 CAMKMTQ7Z624 323 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 CACTIN-AS1Q8N1I8 211 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 FAM47BQ8NA70 645 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 SLC38A9Q8NBW4 561 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 OR51Q1Q8NH59 317 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.43■□□□□ 0.54
SGCE-207ENST00000447873 UCN3Q969E3 161 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 COQ8BQ96D53 544 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 PEX11GQ96HA9 241 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 TAAR9Q96RI9 348 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 DUSP26Q9BV47 211 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 YIPF2Q9BWQ6 316 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 RPF2Q9H7B2 306 aaKnown RBP18.43■□□□□ 0.54
SGCE-207ENST00000447873 SLC52A3Q9NQ40 469 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 C5AR2Q9P296 337 aa18.43■□□□□ 0.54
SGCE-207ENST00000447873 BBIP1A8MTZ0 92 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 CYR61O00622 381 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 TBX19O60806 448 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 FBLP22087 321 aaKnown RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 SYT16Q17RD7 645 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 C3orf38Q5JPI3 329 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ARHGAP40Q5TG30 622 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 OR4F3Q6IEY1 312 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 OR52E8Q6IFG1 317 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 VPS37AQ8NEZ2 397 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ADAMTS18Q8TE60 1221 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 PMEPA1Q969W9 287 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 EXOSC8Q96B26 276 aaKnown RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ZPBPQ9BS86 351 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 ASPSCR1Q9BZE9 553 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 EFCAB1Q9HAE3 211 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 LEF1Q9UJU2 399 aaPredicted RBP18.42■□□□□ 0.54
SGCE-207ENST00000447873 UTS2RQ9UKP6 389 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 PSME2Q9UL46 239 aa18.42■□□□□ 0.54
SGCE-207ENST00000447873 FER1L5A0AVI2 2057 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms