RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 SIRT6Q8N6T7 355 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 BRIX1Q8TDN6 353 aaKnown RBP15.38■□□□□ 0.05
SF3A1-204ENST00000447376 ZBTB9Q96C00 473 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 MTFMTQ96DP5 389 aaKnown RBP15.38■□□□□ 0.05
SF3A1-204ENST00000447376 IMMP1LQ96LU5 166 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 WDR77Q9BQA1 342 aaPredicted RBP15.38■□□□□ 0.05
SF3A1-204ENST00000447376 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 TRMOQ9BU70 441 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 EPN3Q9H201 632 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 WDR41Q9HAD4 459 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 PRDM7Q9NQW5 492 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 LYARQ9NX58 379 aaKnown RBP15.38■□□□□ 0.05
SF3A1-204ENST00000447376 MAP10Q9P2G4 905 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 TRPS1Q9UHF7 1281 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 PPT2Q9UMR5 302 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 MED13Q9UHV7 2174 aa15.38■□□□□ 0.05
SF3A1-204ENST00000447376 BOD1L1Q8NFC6 3051 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 ARHGAP10A1A4S6 786 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 FAM227AF5H4B4 570 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 DNAJB6O75190 326 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 CRCPO75575 148 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 TBX6O95947 436 aaPredicted RBP15.37■□□□□ 0.05
SF3A1-204ENST00000447376 KRT6AP02538 564 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 KRT6BP04259 564 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 ENO1P06733 434 aaKnown RBP15.37■□□□□ 0.05
SF3A1-204ENST00000447376 PPP2R1BP30154 601 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 HMOX2P30519 316 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 KRT6CP48668 564 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 ARG2P78540 354 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 BTG2P78543 158 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 Q0VFX4 171 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 NADK2Q4G0N4 442 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 AGBL2Q5U5Z8 902 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 FRMD7Q6ZUT3 714 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 NUDT13Q86X67 352 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 SUN3Q8TAQ9 357 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 DNAJB14Q8TBM8 379 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 WDR20Q8TBZ3 569 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 SELENOMQ8WWX9 145 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 CNDP1Q96KN2 507 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 SLC29A3Q9BZD2 475 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 GSTO2Q9H4Y5 243 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 KCNK13Q9HB14 408 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 FBXW2Q9UKT8 454 aa15.37■□□□□ 0.05
SF3A1-204ENST00000447376 TNRC6AQ8NDV7 1962 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 TCRBV16S1A1N1A0A5B0 115 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 A8MUI8 341 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 RTCAO00442 366 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 DYRK3O43781 588 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 OR4F21O95013 312 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SEMA3DO95025 777 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SCELO95171 688 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ESRRBO95718 433 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 IFNA16P05015 189 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ITGAMP11215 1152 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ALDH3A1P30838 453 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 NEK2P51955 445 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 MAGOHP61326 146 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ZNF33BQ06732 778 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SLAMF1Q13291 335 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SERTAD2Q14140 314 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SGO1Q5FBB7 561 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SLC6A19Q695T7 634 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 LETMD1Q6P1Q0 360 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ATCAYQ86WG3 371 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ZCCHC7Q8N3Z6 543 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 SLC5A8Q8N695 610 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 PPP1R14CQ8TAE6 165 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 METTL6Q8TCB7 284 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 ZNF354BQ96LW1 612 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 MAPKAP1Q9BPZ7 522 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 EML4Q9HC35 981 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 MMP25Q9NPA2 562 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 MID1IP1Q9NPA3 183 aa15.36■□□□□ 0.05
SF3A1-204ENST00000447376 PNO1Q9NRX1 252 aaKnown RBP15.36■□□□□ 0.05
SF3A1-204ENST00000447376 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 PPP6CO00743 305 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 PLPP1O14494 284 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 BIRC5O15392 142 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 CTNSO60931 367 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 GUCY1B2O75343 617 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 BPGMP07738 259 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 NEFHP12036 1026 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 COX7A2P14406 83 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 SERPINB5P36952 375 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 SERPINB4P48594 390 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 EFNA3P52797 238 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 SLC26A5P58743 744 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 BIKQ13323 160 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 TLR1Q15399 786 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 TERF2Q15554 542 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 IGFL2Q6UWQ7 119 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 ZNF793Q6ZN11 406 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 UBE3DQ7Z6J8 389 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 GPR180Q86V85 440 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 SCUBE1Q8IWY4 988 aa15.35■□□□□ 0.05
SF3A1-204ENST00000447376 TMEM132CQ8N3T6 1108 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms