RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SLC6A2P23975 617 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ACADSBP45954 432 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 SULT1E1P49888 294 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 HLCSP50747 726 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 GYS2P54840 703 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 CLRN1P58418 232 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 C21orf58P58505 322 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 DSCR9P59020 149 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 DEUP1Q05D60 604 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 LRMPQ12912 555 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TRAF2Q12933 501 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 NFE2L1Q14494 772 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 KRT33BQ14525 404 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ANKRD1Q15327 319 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF362Q5T0B9 420 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-205ENST00000447267 C1QTNF12Q5T7M4 302 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ASPHD2Q6ICH7 369 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TTI2Q6NXR4 508 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM270Q6UE05 265 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 SPESP1Q6UW49 350 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 KRBA2Q6ZNG9 492 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 LHFPL2Q6ZUX7 228 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 HOOK3Q86VS8 718 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ADGRF3Q8IZF5 1079 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 SLC5A8Q8N695 610 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 OR56A1Q8NGH5 318 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 GOLGA5Q8TBA6 731 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 RAB3IL1Q8TBN0 382 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 C10orf105Q8TEF2 133 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 GTF3AQ92664 365 aaKnown RBP4.48□□□□□ -1.69
SDCBP-205ENST00000447267 PROX1Q92786 737 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TBCBQ99426 244 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 NPY6RQ99463 290 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 PAIP2Q9BPZ3 127 aaKnown RBP4.48□□□□□ -1.69
SDCBP-205ENST00000447267 NTMT1Q9BV86 223 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TTTY12Q9BZ98 90 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 QRSL1Q9H0R6 528 aaKnown RBP4.48□□□□□ -1.69
SDCBP-205ENST00000447267 THAP2Q9H0W7 228 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 PDFQ9HBH1 243 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TMEM248Q9NWD8 314 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 ASNSD1Q9NWL6 643 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 RAB20Q9NX57 234 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TRPC4Q9UBN4 977 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 SMC3Q9UQE7 1217 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
SDCBP-205ENST00000447267 TRGV5A0A0B4J1U4 118 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 A8MXE2 369 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 C2orf74A8MZ97 194 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 EPHB6O15197 1021 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 ZNF354AO60765 605 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 HSF2BPO75031 334 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 COQ9O75208 318 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 POP7O75817 140 aaKnown RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 LY6HO94772 140 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 CDK14O94921 469 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 MT-CYBP00156 380 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 NR3C1P04150 777 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 PDHA1P08559 390 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 UGT2B7P16662 529 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 PBLDP30039 288 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 PTPN7P35236 360 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 STC1P52823 247 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 KRTAP10-3P60369 221 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 RAP2BP61225 183 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 IRX1P78414 480 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 DSC2Q02487 901 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SLC10A1Q14973 349 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SYT16Q17RD7 645 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 PGGHGQ32M88 737 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 DEFB121Q5J5C9 76 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 HENMT1Q5T8I9 393 aaKnown RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 ADAMTSL5Q6ZMM2 481 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 BNIPLQ7Z465 357 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 CPEB2Q7Z5Q1 589 aaKnown RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 KIAA1328Q86T90 577 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 FAM131BQ86XD5 332 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 GPSM1Q86YR5 675 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 TRAPPC5Q8IUR0 188 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 LACC1Q8IV20 430 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 RHOT2Q8IXI1 618 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 C9orf106Q8NAJ2 232 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 OR2M7Q8NG81 312 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 GATAD1Q8WUU5 269 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SLC44A1Q8WWI5 657 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 STON2Q8WXE9 905 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 NT5C3BQ969T7 300 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 FAM111AQ96PZ2 611 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 GSDMAQ96QA5 445 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 MCCC1Q96RQ3 725 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SLC6A7Q99884 636 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 CDC42EP4Q9H3Q1 356 aaKnown RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 CLSTN2Q9H4D0 955 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 FAM83DQ9H4H8 585 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 IFT22Q9H7X7 185 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-205ENST00000447267 NOD2Q9HC29 1040 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SPHK1Q9NYA1 384 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 OR12D3Q9UGF7 316 aa4.47□□□□□ -1.69
SDCBP-205ENST00000447267 SLC23A1Q9UHI7 598 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms