RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 LRRN1Q6UXK5 716 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 AHSA2Q719I0 299 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF765Q7L2R6 523 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF101Q8IZC7 436 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 PYCR2Q96C36 320 aa8.22□□□□□ -1.09
PTPN3-204ENST00000446349 CPSF4LA6NMK7 179 aaKnown RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 WASH4PA8MWX3 477 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CYB5BO43169 146 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 HCRTR2O43614 444 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 PRKCGP05129 697 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 ITGA3P26006 1051 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CDKN1CP49918 316 aaPredicted RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 BNIP1Q12981 228 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 PTPRCAPQ14761 206 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SWT1Q5T5J6 900 aaKnown RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CENPSQ8N2Z9 138 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 DENND6BQ8NEG7 585 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SGIP1Q9BQI5 828 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CACNA1SQ13698 1873 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 TRPM3Q9HCF6 1732 aaPredicted RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CCL22O00626 93 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 S100A9P06702 114 aaKnown RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 EDNRAP25101 427 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 MAGEA8P43361 318 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 DCAF7P61962 342 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SIM2Q14190 667 aaPredicted RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CRTC2Q53ET0 693 aaPredicted RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 ELP5Q8TE02 316 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 USP54Q70EL1 1684 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 FAAHO00519 579 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 DNAJB5O75953 348 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 HCKP08631 526 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 STOMP27105 288 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 EIF2DP41214 584 aaKnown RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 ACADVLP49748 655 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 HERV-K104P61576 105 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 LASP1Q14847 261 aaKnown RBP8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SH3PXD2AQ5TCZ1 1133 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 OR4C11Q6IEV9 310 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 ARHGAP11AQ6P4F7 1023 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 STX12Q86Y82 276 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 MFSD6LQ8IWD5 586 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 PMM1Q92871 262 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 CIB1Q99828 191 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 MED28Q9H204 178 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 EMC3Q9P0I2 261 aa8.21□□□□□ -1.09
PTPN3-204ENST00000446349 A0A0D9SEW6 157 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 PET100P0DJ07 73 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 C7P10643 843 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ETV3P41162 512 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 NOVP48745 357 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ENPP6Q6UWR7 440 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 DPPA4Q7L190 304 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 OR9A4Q8NGU2 314 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 SMURF1Q9HCE7 757 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 OR6C2Q9NZP2 312 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 hCG_2039718K7EN88 272 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF821O75541 412 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-204ENST00000446349 MT-ND2P03891 347 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 CLCN2P51788 898 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF678Q5SXM1 525 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 GLT8D1Q68CQ7 371 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 C15orf39Q6ZRI6 1047 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 SLC51AQ86UW1 340 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 OR52B2Q96RD2 323 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ZFYVE21Q9BQ24 234 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 IKZF4Q9H2S9 585 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 RPF2Q9H7B2 306 aaKnown RBP8.21□□□□□ -1.1
PTPN3-204ENST00000446349 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 IL3P08700 152 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 PNMTP11086 282 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 UGT3A2Q3SY77 523 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 COQ5Q5HYK3 327 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 TRMT10BQ6PF06 316 aaKnown RBP8.21□□□□□ -1.1
PTPN3-204ENST00000446349 FIGLAQ6QHK4 219 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ZBTB26Q9HCK0 441 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 MED11Q9P086 117 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 FMO3P31513 532 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 UGT2B10P36537 528 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 OR2B6P58173 313 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF460Q14592 562 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 TUBA3EQ6PEY2 450 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 GALNTL5Q7Z4T8 443 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 INO80EQ8NBZ0 244 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-204ENST00000446349 AGAP11Q8TF27 550 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 PWWP2AQ96N64 755 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 MNTQ99583 582 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 DKK3Q9UBP4 350 aa8.21□□□□□ -1.1
PTPN3-204ENST00000446349 MCTS1Q9ULC4 181 aaKnown RBP8.21□□□□□ -1.1
PTPN3-204ENST00000446349 TBX1O43435 398 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MAFKO60675 156 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 SASH3O75995 380 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GRIA1P42261 906 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TTLL10Q6ZVT0 673 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PLD6Q8N2A8 252 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CBR4Q8N4T8 237 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF578Q96N58 590 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 IP6K3Q96PC2 410 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms